Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL121594.4-201ENST00000556211 1196 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 MTCO3P22-201ENST00000603219 784 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AC119501.1-201ENST00000603646 475 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AC034236.3-201ENST00000605999 461 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AL161616.1-201ENST00000611867 286 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 MIR8084-201ENST00000614105 89 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 MIR6853-201ENST00000619642 74 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AC105105.5-201ENST00000622635 1294 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AC021106.3-201ENST00000623925 531 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AP002967.1-201ENST00000624203 539 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AC019080.5-201ENST00000624891 757 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AC004808.1-201ENST00000627671 721 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AL442639.1-201ENST00000625030 1899 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 UGT2B26P-201ENST00000508672 1613 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AC000123.3-201ENST00000624029 4975 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 RNU1-82P-201ENST00000390851 165 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 RNU6-1000P-201ENST00000391066 106 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 MTATP6P31-201ENST00000406985 692 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 RGS17P1-201ENST00000423358 553 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 MTCO2P17-201ENST00000424336 677 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AC011242.1-201ENST00000433596 1158 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 RPL36AP15-201ENST00000444514 266 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AC006967.1-201ENST00000467608 589 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 RPL21P6-201ENST00000479171 504 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AC011005.3-201ENST00000491624 395 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 RNA5SP464-201ENST00000516251 108 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 RNU1-6P-201ENST00000516290 144 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 snoU109.6-201ENST00000516831 118 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 MIR4700-201ENST00000578311 74 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AC091057.3-201ENST00000602684 733 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AC023762.1-201ENST00000603280 584 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AC098935.2-201ENST00000604222 466 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AC096553.1-201ENST00000605169 829 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AL096803.3-201ENST00000609032 532 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 AC010928.1-201ENST00000592477 1447 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.12□□□□□ -1.59
SNX9Q9Y5X1 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 CASC19-204ENST00000641001 2055 ntBASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 RNVU1-6-201ENST00000364688 164 ntBASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 CYB5AP4-201ENST00000396692 399 ntBASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 FABP7P1-201ENST00000424004 391 ntBASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 RNFT1P2-201ENST00000443064 757 ntBASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 BUD31P2-201ENST00000449374 300 ntBASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 NPM1P17-201ENST00000479221 602 ntBASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 AC007686.1-201ENST00000488511 463 ntBASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 GTF2IP9-201ENST00000502460 301 ntBASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 BTG4P1-201ENST00000510421 183 ntBASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 CDH12P4-201ENST00000517835 295 ntBASIC5.11□□□□□ -1.59
SNX9Q9Y5X1 CDH12P3-201ENST00000517935 295 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms