Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 RN7SKP202-201ENST00000410439 330 ntBASIC5.39□□□□□ -1.55
SCN11AQ9UI33 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 AL133547.1-201ENST00000448546 220 ntBASIC5.39□□□□□ -1.55
SCN11AQ9UI33 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 AP000889.1-201ENST00000530968 660 ntBASIC5.39□□□□□ -1.55
SCN11AQ9UI33 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 AC022655.2-201ENST00000577280 318 ntBASIC5.39□□□□□ -1.55
SCN11AQ9UI33 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 MIR5684-201ENST00000585074 65 ntBASIC5.39□□□□□ -1.55
SCN11AQ9UI33 CASC19-261ENST00000641853 1638 ntBASIC5.39□□□□□ -1.55
SCN11AQ9UI33 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 HMGB3P5-201ENST00000428894 612 ntBASIC5.39□□□□□ -1.55
SCN11AQ9UI33 PPIAP13-201ENST00000434706 478 ntBASIC5.39□□□□□ -1.55
SCN11AQ9UI33 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 RPS26P2-201ENST00000440331 348 ntBASIC5.39□□□□□ -1.55
SCN11AQ9UI33 AC146944.2-203ENST00000502493 354 ntBASIC5.39□□□□□ -1.55
SCN11AQ9UI33 AC139495.1-202ENST00000513164 354 ntBASIC5.39□□□□□ -1.55
SCN11AQ9UI33 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 AL049840.6-202ENST00000603373 279 ntBASIC5.39□□□□□ -1.55
SCN11AQ9UI33 AC243756.2-201ENST00000618406 463 ntBASIC5.39□□□□□ -1.55
SCN11AQ9UI33 AC091953.5-201ENST00000622919 233 ntBASIC5.39□□□□□ -1.55
SCN11AQ9UI33 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN11AQ9UI33 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 SNORD66.1-201ENST00000391230 76 ntBASIC5.38□□□□□ -1.55
SCN11AQ9UI33 PEX12P1-201ENST00000400284 1048 ntBASIC5.38□□□□□ -1.55
SCN11AQ9UI33 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 RPL6P5-201ENST00000445678 828 ntBASIC5.38□□□□□ -1.55
SCN11AQ9UI33 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 DEFB109F-201ENST00000491870 277 ntBASIC5.38□□□□□ -1.55
SCN11AQ9UI33 BNIP3P41-201ENST00000503774 571 ntBASIC5.38□□□□□ -1.55
SCN11AQ9UI33 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN11AQ9UI33 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.37□□□□□ -1.55
SCN11AQ9UI33 SNORA9-201ENST00000384215 133 ntBASIC5.37□□□□□ -1.55
SCN11AQ9UI33 U3.23-201ENST00000391132 200 ntBASIC5.37□□□□□ -1.55
SCN11AQ9UI33 OR8F1P-201ENST00000425243 930 ntBASIC5.37□□□□□ -1.55
SCN11AQ9UI33 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 AC097505.1-201ENST00000610199 565 ntBASIC5.37□□□□□ -1.55
SCN11AQ9UI33 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 EOGT-210ENST00000615922 1931 ntBASIC5.37□□□□□ -1.55
SCN11AQ9UI33 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 AC010266.2-201ENST00000564741 3255 ntBASIC5.37□□□□□ -1.55
SCN11AQ9UI33 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 AC027176.2-201ENST00000559166 746 ntBASIC5.37□□□□□ -1.55
SCN11AQ9UI33 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.37□□□□□ -1.55
SCN11AQ9UI33 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.36□□□□□ -1.55
SCN11AQ9UI33 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms