Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
DKK3Q9UBP4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
DKK3Q9UBP4 AL158042.1-201ENST00000605338 460 ntBASIC5.43□□□□□ -1.54
DKK3Q9UBP4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.43□□□□□ -1.54
DKK3Q9UBP4 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.43□□□□□ -1.54
DKK3Q9UBP4 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
DKK3Q9UBP4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.43□□□□□ -1.54
DKK3Q9UBP4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
DKK3Q9UBP4 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
DKK3Q9UBP4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.43□□□□□ -1.54
DKK3Q9UBP4 AL590763.1-201ENST00000398297 1545 ntBASIC5.43□□□□□ -1.54
DKK3Q9UBP4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
DKK3Q9UBP4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
DKK3Q9UBP4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.43□□□□□ -1.54
DKK3Q9UBP4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
DKK3Q9UBP4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AC017007.4-201ENST00000503353 1352 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 RN7SKP103-201ENST00000363848 320 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 Y_RNA.318-201ENST00000365131 97 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 RNU6-224P-201ENST00000384055 107 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 Y_RNA.472-201ENST00000384322 102 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 RNU6-171P-201ENST00000384354 107 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 SNORA67-201ENST00000384423 137 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 RNA5SP105-201ENST00000391123 113 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 RPL35AP24-201ENST00000413846 330 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AC108075.1-201ENST00000424692 529 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AC022022.1-201ENST00000430304 178 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AL365396.1-201ENST00000430854 671 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 NDUFA5P10-201ENST00000432147 357 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AL035458.1-201ENST00000433096 585 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 UBE2D3P1-201ENST00000436669 444 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AL008629.1-201ENST00000438615 184 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 MTCYBP12-201ENST00000440559 1134 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 HMGB3P9-201ENST00000441799 583 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 TCEA1P3-201ENST00000443005 880 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 EXTL2P1-201ENST00000446218 416 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AC243772.1-201ENST00000451620 410 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 RPL7P32-201ENST00000457119 744 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AC005410.1-202ENST00000460347 485 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 RN7SL172P-201ENST00000460535 303 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 RPS20P4-201ENST00000461659 355 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AC092754.1-201ENST00000472975 479 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AP000926.4-201ENST00000527351 454 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AP004607.2-201ENST00000533949 322 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AC004825.1-201ENST00000555068 586 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AC012557.1-201ENST00000607115 611 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 OR2BH1P-201ENST00000608850 864 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AL392048.1-201ENST00000613946 534 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 OR1S1-201ENST00000624470 978 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 MIR1322-201ENST00000638013 71 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 THAP12P5-201ENST00000405864 2275 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AC109780.1-201ENST00000451768 1344 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AL450326.2-201ENST00000421913 1962 ntBASIC5.42□□□□□ -1.54
DKK3Q9UBP4 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.42□□□□□ -1.54
DKK3Q9UBP4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 OR55B1P-203ENST00000641518 2602 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms