Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PARPBPQ9NWS1 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PARPBPQ9NWS1 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PARPBPQ9NWS1 AL355488.2-201ENST00000609909 2850 ntBASIC5.26□□□□□ -1.57
PARPBPQ9NWS1 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC003985.2-201ENST00000562268 1669 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AL359955.1-201ENST00000455242 3275 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 Y_RNA.70-201ENST00000362886 110 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 RN7SKP81-201ENST00000365603 331 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 RNU6-761P-201ENST00000384148 107 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 RNU6-253P-201ENST00000384730 105 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 TAF9BP1-201ENST00000396646 746 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 MTCO3P31-201ENST00000405526 789 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 RNU6-575P-201ENST00000411326 105 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 PRUNEP1-201ENST00000425846 705 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 NANOGP4-201ENST00000427230 913 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 KCTD9P1-201ENST00000430462 1167 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 DEFA9P-201ENST00000433042 285 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC008072.1-201ENST00000434254 824 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 HMGB1P45-201ENST00000435986 653 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 EIF5AP4-201ENST00000441206 465 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC023141.8-201ENST00000442554 208 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 RPS26P30-201ENST00000443431 335 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 WASF1P1-201ENST00000447560 1131 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 EPS15P1-201ENST00000448836 336 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC003071.1-201ENST00000451219 789 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC092001.1-201ENST00000453012 261 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 MTND2P24-201ENST00000453434 806 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC072039.1-201ENST00000477611 581 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC079080.1-201ENST00000479841 822 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 RN7SL193P-201ENST00000491708 276 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 RN7SL57P-201ENST00000493687 290 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 ARL2BPP4-201ENST00000506854 471 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 TRIM77BP-201ENST00000524985 1119 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 OR8Q1P-201ENST00000526467 655 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AP000648.1-201ENST00000529682 397 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC124293.1-201ENST00000530034 493 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 YWHABP2-201ENST00000540201 713 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AL163952.1-202ENST00000569625 600 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 MIR4260-201ENST00000583107 67 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 BNIP3P33-201ENST00000598912 569 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 EIF1P6-201ENST00000600054 334 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AL592221.1-201ENST00000605266 382 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC138932.5-201ENST00000617759 563 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC022400.9-201ENST00000623633 273 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC016717.3-201ENST00000624730 554 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC099654.6-201ENST00000636487 512 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AC000095.2-202ENST00000637415 154 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 AL022311.1-201ENST00000623726 19416 ntBASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
PARPBPQ9NWS1 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms