Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 Z85994.2-201ENST00000434327 452 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 AP000936.3-201ENST00000438127 255 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 VN1R32P-201ENST00000452234 905 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 CALM1P2-201ENST00000452941 448 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 UBTFL6-201ENST00000477929 1024 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 AC012158.1-204ENST00000483430 465 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 NIP7P2-201ENST00000485801 544 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 RN7SL205P-201ENST00000490174 284 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 snoU109.6-201ENST00000516831 118 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 IGHV3-63-201ENST00000518422 341 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 AC069061.3-201ENST00000582254 823 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 RN7SL52P-201ENST00000584271 284 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 BMS1P7-201ENST00000602440 1052 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 AC008782.1-201ENST00000603386 430 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 AC115286.1-201ENST00000604298 434 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 AC034236.3-201ENST00000605999 461 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 RN7SL722P-201ENST00000617780 284 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 RN7SL565P-201ENST00000618246 284 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 AL391597.1-201ENST00000618707 694 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 AL049536.1-201ENST00000625043 744 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 AC092435.4-201ENST00000623012 4159 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 AP001273.1-201ENST00000624493 3152 ntBASIC5.02□□□□□ -1.61
CCSER1Q9C0I3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 NOL8P1-201ENST00000508336 3529 ntBASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 AC107027.3-201ENST00000565095 3473 ntBASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 AL512430.2-201ENST00000406786 339 ntBASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 AC093716.1-201ENST00000435923 377 ntBASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 RNA5SP497-201ENST00000516081 97 ntBASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 MIR5096-201ENST00000583713 70 ntBASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 NEAT1-202ENST00000501122 22743 ntBASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.01□□□□□ -1.61
CCSER1Q9C0I3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5□□□□□ -1.61
CCSER1Q9C0I3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCSER1Q9C0I3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CCSER1Q9C0I3 AL450326.2-201ENST00000421913 1962 ntBASIC5□□□□□ -1.61
CCSER1Q9C0I3 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5□□□□□ -1.61
CCSER1Q9C0I3 AL592148.3-201ENST00000608771 2646 ntBASIC5□□□□□ -1.61
CCSER1Q9C0I3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCSER1Q9C0I3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
CCSER1Q9C0I3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
CCSER1Q9C0I3 OR56B2P-202ENST00000641377 2453 ntBASIC5□□□□□ -1.61
CCSER1Q9C0I3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCSER1Q9C0I3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCSER1Q9C0I3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCSER1Q9C0I3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CCSER1Q9C0I3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms