Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MIR1271-201ENST00000408537 86 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 RN7SKP222-201ENST00000410651 315 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC006960.1-201ENST00000419980 153 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC012519.1-201ENST00000424588 610 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 AL593851.1-201ENST00000426171 157 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 AL035407.1-201ENST00000429211 571 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 CDY14P-201ENST00000431260 1014 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC016772.1-201ENST00000444170 1261 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 EEF1B2P5-201ENST00000444820 548 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 HMGB1P48-201ENST00000446155 598 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 AL929288.2-201ENST00000446368 407 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 CDY23P-201ENST00000451661 1014 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 AL445665.1-202ENST00000452436 324 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 YWHAEP1-201ENST00000453697 763 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 MTND4LP3-201ENST00000468320 276 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 RPL35AP19-201ENST00000469425 329 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 RPL32P33-201ENST00000487023 394 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 RN7SL214P-201ENST00000487317 265 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 XKRY-201ENST00000510392 1100 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 SCARNA6.1-201ENST00000516989 238 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 YWHABP2-201ENST00000540201 713 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 ELOCP32-201ENST00000548625 324 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC044913.1-201ENST00000557200 430 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC087465.1-201ENST00000560574 245 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC063977.5-201ENST00000601044 974 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC124312.4-201ENST00000605533 310 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 MIR6768-201ENST00000610734 72 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX18Q96RF0 AL592148.2-201ENST00000612210 372 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 HULC.1-201ENST00000612720 240 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 AL354976.1-201ENST00000613843 387 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX18Q96RF0 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC021106.3-201ENST00000623925 531 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC073530.2-201ENST00000623987 261 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX18Q96RF0 AL137100.1-201ENST00000556703 1620 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX18Q96RF0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC106872.5-201ENST00000508856 1416 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX18Q96RF0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX18Q96RF0 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX18Q96RF0 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX18Q96RF0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX18Q96RF0 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX18Q96RF0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX18Q96RF0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX18Q96RF0 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX18Q96RF0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX18Q96RF0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 Y_RNA.201-201ENST00000364052 96 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 RN7SKP292-201ENST00000365522 317 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 RNU6-98P-201ENST00000384173 107 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 U3.28-201ENST00000391249 210 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 COX5BP7-201ENST00000414780 274 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 TIMM9P2-201ENST00000419324 266 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC079355.1-201ENST00000421770 223 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 OR5AW1P-201ENST00000426334 1006 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.02□□□□□ -1.61
SNX18Q96RF0 HMGB1P45-201ENST00000435986 653 ntBASIC5.02□□□□□ -1.61
SNX18Q96RF0 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms