Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AL121873.1-201ENST00000616013 524 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AC139713.2-215ENST00000641428 5037 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 CASC19-204ENST00000641001 2055 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AC025031.4-201ENST00000621248 3271 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
ECHDC3Q96DC8 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.46□□□□□ -1.69
ECHDC3Q96DC8 AP001002.1-201ENST00000625148 1513 ntBASIC4.46□□□□□ -1.69
ECHDC3Q96DC8 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
ECHDC3Q96DC8 A2MP1-204ENST00000566278 4130 ntBASIC4.46□□□□□ -1.69
ECHDC3Q96DC8 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 AC019155.1-201ENST00000382242 574 ntBASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 HMGB1P32-201ENST00000425971 565 ntBASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 CDY14P-201ENST00000431260 1014 ntBASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 PPIAP13-201ENST00000434706 478 ntBASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 CDY12P-201ENST00000440679 1015 ntBASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 CDY13P-201ENST00000445813 1015 ntBASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 CDY23P-201ENST00000451661 1014 ntBASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 RPL23AP24-201ENST00000458203 385 ntBASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 RN7SL98P-201ENST00000462271 300 ntBASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 ATP5G1P3-201ENST00000463301 410 ntBASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 CEACAMP10-202ENST00000495431 496 ntBASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 SNORD116-30-201ENST00000516468 85 ntBASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 PDCD5P1-201ENST00000543528 309 ntBASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 MIR4277-201ENST00000578298 84 ntBASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 AC103792.1-201ENST00000603591 919 ntBASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 AC140113.4-201ENST00000622087 222 ntBASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 MFSD8-242ENST00000641690 4199 ntBASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ECHDC3Q96DC8 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 RNA5SP307-201ENST00000362863 116 ntBASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 RNA5SP105-201ENST00000391123 113 ntBASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 AC016397.1-201ENST00000412463 242 ntBASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 AC016712.1-201ENST00000431088 378 ntBASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 AL357520.1-201ENST00000441557 453 ntBASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 RPS27AP17-201ENST00000463344 455 ntBASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 AC011276.1-201ENST00000469688 323 ntBASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 RPL23AP65-201ENST00000475608 468 ntBASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 RPS27AP16-201ENST00000492222 470 ntBASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 CCNHP1-201ENST00000513311 678 ntBASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 IGLVIV-65-201ENST00000517313 360 ntBASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 AC010476.1-201ENST00000519111 851 ntBASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 AC021483.2-201ENST00000567415 758 ntBASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 AC009704.2-201ENST00000618739 483 ntBASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 AC005086.4-201ENST00000623065 213 ntBASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 AC015908.5-201ENST00000623289 343 ntBASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.45□□□□□ -1.7
ECHDC3Q96DC8 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 EOGT-210ENST00000615922 1931 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 AC010300.1-201ENST00000600671 5134 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 IGKV7-3-201ENST00000357453 298 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 RNU6-697P-201ENST00000363348 107 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 RNA5SP509-201ENST00000364577 119 ntBASIC4.44□□□□□ -1.7
ECHDC3Q96DC8 ATP5F1P2-201ENST00000398143 760 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms