Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ERCC4Q92889 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.08□□□□□ -1.44
ERCC4Q92889 AL118522.2-201ENST00000616045 615 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 AP003497.2-201ENST00000624220 967 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 AC091965.5-201ENST00000624785 342 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.08□□□□□ -1.44
ERCC4Q92889 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
ERCC4Q92889 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ERCC4Q92889 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
ERCC4Q92889 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ERCC4Q92889 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ERCC4Q92889 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.08□□□□□ -1.44
ERCC4Q92889 AC106872.5-201ENST00000508856 1416 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC4Q92889 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
ERCC4Q92889 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC4Q92889 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
ERCC4Q92889 AC004817.4-201ENST00000602396 3625 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC4Q92889 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC4Q92889 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC4Q92889 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
ERCC4Q92889 RNU6-543P-201ENST00000362576 108 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 RNA5SP510-201ENST00000364697 99 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 OR1L6-202ENST00000373684 1044 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC4Q92889 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
ERCC4Q92889 RNU6-1320P-201ENST00000390838 107 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 RNU6-1269P-201ENST00000391139 107 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 HMGB3P18-201ENST00000406327 590 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 AL593851.1-201ENST00000426171 157 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 RPL19P16-201ENST00000433839 588 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 FMO7P-201ENST00000436045 768 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 MUPP-201ENST00000438111 566 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 MTND1P34-201ENST00000438556 671 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.07□□□□□ -1.44
ERCC4Q92889 AC092170.1-201ENST00000440211 356 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 AC097262.1-201ENST00000452559 548 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.07□□□□□ -1.44
ERCC4Q92889 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.07□□□□□ -1.44
ERCC4Q92889 RNU7-125P-201ENST00000458760 62 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 RNU6-599P-201ENST00000459383 107 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 RNU6-1193P-201ENST00000459461 107 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC4Q92889 ENPP7P11-201ENST00000505915 627 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 MTND4P2-201ENST00000507767 1203 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 MTCYBP37-201ENST00000510642 1133 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.07□□□□□ -1.44
ERCC4Q92889 HIGD1AP18-201ENST00000520730 278 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.07□□□□□ -1.44
ERCC4Q92889 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.07□□□□□ -1.44
ERCC4Q92889 AC027369.5-201ENST00000533838 755 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 AC010198.2-201ENST00000550612 259 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC6.07□□□□□ -1.44
ERCC4Q92889 AADACP1-206ENST00000561502 1193 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
ERCC4Q92889 AP001094.1-201ENST00000579805 193 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 AC027243.2-201ENST00000602530 724 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 AC072039.2-201ENST00000608883 439 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC4Q92889 RNU6-368P-201ENST00000620928 107 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 RNU6-538P-201ENST00000622329 107 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 MIR193BHG-214ENST00000641765 509 ntBASIC6.07□□□□□ -1.44
ERCC4Q92889 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.07□□□□□ -1.44
ERCC4Q92889 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.07□□□□□ -1.44
ERCC4Q92889 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC4Q92889 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC4Q92889 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.07□□□□□ -1.44
ERCC4Q92889 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
ERCC4Q92889 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC4Q92889 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.07□□□□□ -1.44
ERCC4Q92889 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ERCC4Q92889 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.06□□□□□ -1.44
ERCC4Q92889 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
ERCC4Q92889 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.06□□□□□ -1.44
ERCC4Q92889 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ERCC4Q92889 AC011755.1-201ENST00000623763 2049 ntBASIC6.06□□□□□ -1.44
ERCC4Q92889 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
ERCC4Q92889 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.06□□□□□ -1.44
ERCC4Q92889 NACA3P-201ENST00000359690 648 ntBASIC6.06□□□□□ -1.44
ERCC4Q92889 RNU6-304P-201ENST00000364855 107 ntBASIC6.06□□□□□ -1.44
ERCC4Q92889 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ERCC4Q92889 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ERCC4Q92889 RNU6-729P-201ENST00000384399 107 ntBASIC6.06□□□□□ -1.44
ERCC4Q92889 DBIP1-201ENST00000401435 260 ntBASIC6.06□□□□□ -1.44
ERCC4Q92889 OR4K12P-201ENST00000406538 961 ntBASIC6.06□□□□□ -1.44
ERCC4Q92889 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.06□□□□□ -1.44
ERCC4Q92889 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.06□□□□□ -1.44
ERCC4Q92889 RPL23AP19-201ENST00000436229 369 ntBASIC6.06□□□□□ -1.44
ERCC4Q92889 NPM1P13-201ENST00000452663 865 ntBASIC6.06□□□□□ -1.44
ERCC4Q92889 PSMC1P13-201ENST00000458195 985 ntBASIC6.06□□□□□ -1.44
ERCC4Q92889 AC092754.2-201ENST00000463506 460 ntBASIC6.06□□□□□ -1.44
ERCC4Q92889 RN7SL591P-201ENST00000496150 292 ntBASIC6.06□□□□□ -1.44
ERCC4Q92889 AL117351.2-201ENST00000513571 157 ntBASIC6.06□□□□□ -1.44
ERCC4Q92889 RNU6-1004P-201ENST00000516584 111 ntBASIC6.06□□□□□ -1.44
ERCC4Q92889 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
ERCC4Q92889 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6.06□□□□□ -1.44
ERCC4Q92889 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.06□□□□□ -1.44
ERCC4Q92889 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms