Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 RPL7P53-201ENST00000421245 739 ntBASIC3.83□□□□□ -1.8
AP3S1Q92572 AC115283.1-201ENST00000427353 400 ntBASIC3.83□□□□□ -1.8
AP3S1Q92572 RPEP2-201ENST00000432149 701 ntBASIC3.83□□□□□ -1.8
AP3S1Q92572 AL132765.1-201ENST00000434165 553 ntBASIC3.83□□□□□ -1.8
AP3S1Q92572 BTG3P1-201ENST00000435859 716 ntBASIC3.83□□□□□ -1.8
AP3S1Q92572 CYCSP11-201ENST00000436426 315 ntBASIC3.83□□□□□ -1.8
AP3S1Q92572 AC010733.1-201ENST00000451515 401 ntBASIC3.83□□□□□ -1.8
AP3S1Q92572 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.83□□□□□ -1.8
AP3S1Q92572 RAD23BP3-201ENST00000454157 1152 ntBASIC3.83□□□□□ -1.8
AP3S1Q92572 AC096741.1-201ENST00000472250 846 ntBASIC3.83□□□□□ -1.8
AP3S1Q92572 SCARNA22-201ENST00000503991 125 ntBASIC3.83□□□□□ -1.8
AP3S1Q92572 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.83□□□□□ -1.8
AP3S1Q92572 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.83□□□□□ -1.8
AP3S1Q92572 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.83□□□□□ -1.8
AP3S1Q92572 CASP1P2-201ENST00000526830 1258 ntBASIC3.83□□□□□ -1.8
AP3S1Q92572 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.83□□□□□ -1.8
AP3S1Q92572 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC3.83□□□□□ -1.8
AP3S1Q92572 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC3.83□□□□□ -1.8
AP3S1Q92572 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
AP3S1Q92572 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
AP3S1Q92572 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.83□□□□□ -1.8
AP3S1Q92572 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.83□□□□□ -1.8
AP3S1Q92572 AL589674.2-201ENST00000604304 337 ntBASIC3.83□□□□□ -1.8
AP3S1Q92572 MIR486-1-201ENST00000612171 68 ntBASIC3.83□□□□□ -1.8
AP3S1Q92572 AC009318.3-201ENST00000616916 503 ntBASIC3.83□□□□□ -1.8
AP3S1Q92572 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.83□□□□□ -1.8
AP3S1Q92572 CFTRP2-201ENST00000634304 199 ntBASIC3.83□□□□□ -1.8
AP3S1Q92572 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.83□□□□□ -1.8
AP3S1Q92572 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
AP3S1Q92572 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
AP3S1Q92572 BDP1P-201ENST00000582658 1990 ntBASIC3.83□□□□□ -1.8
AP3S1Q92572 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
AP3S1Q92572 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
AP3S1Q92572 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
AP3S1Q92572 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
AP3S1Q92572 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
AP3S1Q92572 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
AP3S1Q92572 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
AP3S1Q92572 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.82□□□□□ -1.8
AP3S1Q92572 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.82□□□□□ -1.8
AP3S1Q92572 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.82□□□□□ -1.8
AP3S1Q92572 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
AP3S1Q92572 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.82□□□□□ -1.8
AP3S1Q92572 MTCO1P14-201ENST00000441695 1559 ntBASIC3.82□□□□□ -1.8
AP3S1Q92572 SAMMSON-226ENST00000642089 1582 ntBASIC3.82□□□□□ -1.8
AP3S1Q92572 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
AP3S1Q92572 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
AP3S1Q92572 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC3.82□□□□□ -1.8
AP3S1Q92572 RAB9AP4-201ENST00000415230 609 ntBASIC3.82□□□□□ -1.8
AP3S1Q92572 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC3.82□□□□□ -1.8
AP3S1Q92572 RPS12P10-201ENST00000427031 377 ntBASIC3.82□□□□□ -1.8
AP3S1Q92572 USP12PY-201ENST00000427677 1064 ntBASIC3.82□□□□□ -1.8
AP3S1Q92572 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.82□□□□□ -1.8
AP3S1Q92572 AC073069.1-201ENST00000428657 441 ntBASIC3.82□□□□□ -1.8
AP3S1Q92572 RPL23AP89-201ENST00000439324 255 ntBASIC3.82□□□□□ -1.8
AP3S1Q92572 RPL31P15-201ENST00000449770 338 ntBASIC3.82□□□□□ -1.8
AP3S1Q92572 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC3.82□□□□□ -1.8
AP3S1Q92572 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.82□□□□□ -1.8
AP3S1Q92572 AC084754.1-201ENST00000463466 464 ntBASIC3.82□□□□□ -1.8
AP3S1Q92572 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.82□□□□□ -1.8
AP3S1Q92572 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.82□□□□□ -1.8
AP3S1Q92572 GAPDHP56-201ENST00000506031 988 ntBASIC3.82□□□□□ -1.8
AP3S1Q92572 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.82□□□□□ -1.8
AP3S1Q92572 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.82□□□□□ -1.8
AP3S1Q92572 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC3.82□□□□□ -1.8
AP3S1Q92572 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.82□□□□□ -1.8
AP3S1Q92572 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.82□□□□□ -1.8
AP3S1Q92572 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.82□□□□□ -1.8
AP3S1Q92572 ARGFXP2-201ENST00000579304 949 ntBASIC3.82□□□□□ -1.8
AP3S1Q92572 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.82□□□□□ -1.8
AP3S1Q92572 VN1R84P-201ENST00000593697 235 ntBASIC3.82□□□□□ -1.8
AP3S1Q92572 FKBP1AP1-201ENST00000594588 318 ntBASIC3.82□□□□□ -1.8
AP3S1Q92572 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
AP3S1Q92572 AC127024.6-201ENST00000621598 424 ntBASIC3.82□□□□□ -1.8
AP3S1Q92572 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.82□□□□□ -1.8
AP3S1Q92572 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
AP3S1Q92572 FAM35DP-201ENST00000323387 2712 ntBASIC3.82□□□□□ -1.8
AP3S1Q92572 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.82□□□□□ -1.8
AP3S1Q92572 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
AP3S1Q92572 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
AP3S1Q92572 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.82□□□□□ -1.8
AP3S1Q92572 Z82217.1-201ENST00000625157 8149 ntBASIC3.81□□□□□ -1.8
AP3S1Q92572 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
AP3S1Q92572 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
AP3S1Q92572 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.81□□□□□ -1.8
AP3S1Q92572 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.81□□□□□ -1.8
AP3S1Q92572 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
AP3S1Q92572 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.81□□□□□ -1.8
AP3S1Q92572 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
AP3S1Q92572 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.81□□□□□ -1.8
AP3S1Q92572 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
AP3S1Q92572 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
AP3S1Q92572 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
AP3S1Q92572 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.81□□□□□ -1.8
AP3S1Q92572 AMD1P2-201ENST00000412936 992 ntBASIC3.81□□□□□ -1.8
AP3S1Q92572 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.81□□□□□ -1.8
AP3S1Q92572 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.81□□□□□ -1.8
AP3S1Q92572 ARAFP1-201ENST00000422172 605 ntBASIC3.81□□□□□ -1.8
AP3S1Q92572 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.81□□□□□ -1.8
AP3S1Q92572 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms