Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 TAF13P2-201ENST00000416876 286 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 OR1AA1P-201ENST00000419597 916 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 AC093084.1-201ENST00000424233 687 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 CLUHP1-201ENST00000435012 1190 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 YWHAQP9-201ENST00000445891 512 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 RPL39P6-201ENST00000448289 150 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 RPL7P31-201ENST00000450192 724 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 RNU7-140P-201ENST00000459546 60 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 RPL30P9-201ENST00000465586 330 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 AC092865.4-201ENST00000477936 615 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 AC060775.1-201ENST00000518241 520 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 ELOCP31-201ENST00000540463 467 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 AC007424.1-203ENST00000554613 687 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 OR4H6P-201ENST00000563771 921 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 MIR4301-201ENST00000577203 66 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 MIR3912-201ENST00000577566 105 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 AL592494.3-201ENST00000609485 464 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 AL603758.1-201ENST00000618654 241 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 AL078596.1-201ENST00000624856 447 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 AC134503.1-201ENST00000633048 54 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
NEDD1Q8NHV4 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
NEDD1Q8NHV4 AL590763.1-201ENST00000398297 1545 ntBASIC7.15□□□□□ -1.27
NEDD1Q8NHV4 AP005901.5-201ENST00000545779 1796 ntBASIC7.15□□□□□ -1.27
NEDD1Q8NHV4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
NEDD1Q8NHV4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
NEDD1Q8NHV4 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
NEDD1Q8NHV4 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
NEDD1Q8NHV4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
NEDD1Q8NHV4 AP000866.6-201ENST00000638898 3579 ntBASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 Y_RNA.86-201ENST00000363020 111 ntBASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 Y_RNA.401-201ENST00000383965 117 ntBASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 Y_RNA.422-201ENST00000384054 114 ntBASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 RNU6-1105P-201ENST00000384774 107 ntBASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 NRBF2P2-201ENST00000413087 861 ntBASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 NPM1P18-201ENST00000434232 732 ntBASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 OR52B5P-201ENST00000435337 951 ntBASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 RPL23AP60-201ENST00000450011 454 ntBASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 AC016027.4-201ENST00000450866 277 ntBASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 AF213884.1-201ENST00000488102 463 ntBASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 RN7SL193P-201ENST00000491708 276 ntBASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 AC098799.3-201ENST00000506095 438 ntBASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 DUTP7-201ENST00000507982 486 ntBASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 ATP1B1P1-201ENST00000509767 915 ntBASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 MRPS21P9-201ENST00000571150 257 ntBASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 AC019322.1-201ENST00000571869 389 ntBASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.14□□□□□ -1.27
NEDD1Q8NHV4 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms