Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL109618.2-201ENST00000605527 211 ntBASIC6.5□□□□□ -1.37
VPS8Q8N3P4 AL121890.2-201ENST00000617644 465 ntBASIC6.5□□□□□ -1.37
VPS8Q8N3P4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 USP9YP4-201ENST00000424401 1745 ntBASIC6.49□□□□□ -1.37
VPS8Q8N3P4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VPS8Q8N3P4 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VPS8Q8N3P4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VPS8Q8N3P4 RLIMP1-201ENST00000339626 1680 ntBASIC6.49□□□□□ -1.37
VPS8Q8N3P4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
VPS8Q8N3P4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
VPS8Q8N3P4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
VPS8Q8N3P4 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
VPS8Q8N3P4 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VPS8Q8N3P4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.49□□□□□ -1.37
VPS8Q8N3P4 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.49□□□□□ -1.37
VPS8Q8N3P4 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
VPS8Q8N3P4 AC084824.1-201ENST00000550917 1005 ntBASIC6.49□□□□□ -1.37
VPS8Q8N3P4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.49□□□□□ -1.37
VPS8Q8N3P4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
VPS8Q8N3P4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
VPS8Q8N3P4 Z95327.2-201ENST00000414579 1873 ntBASIC6.49□□□□□ -1.37
VPS8Q8N3P4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
VPS8Q8N3P4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VPS8Q8N3P4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VPS8Q8N3P4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC6.48□□□□□ -1.37
VPS8Q8N3P4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
VPS8Q8N3P4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VPS8Q8N3P4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.48□□□□□ -1.37
VPS8Q8N3P4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC6.48□□□□□ -1.37
VPS8Q8N3P4 HSPE1P12-201ENST00000412576 301 ntBASIC6.48□□□□□ -1.37
VPS8Q8N3P4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.48□□□□□ -1.37
VPS8Q8N3P4 AL358472.1-201ENST00000431295 329 ntBASIC6.48□□□□□ -1.37
VPS8Q8N3P4 RPS4XP4-201ENST00000443195 763 ntBASIC6.48□□□□□ -1.37
VPS8Q8N3P4 MTCYBP21-201ENST00000443300 1113 ntBASIC6.48□□□□□ -1.37
VPS8Q8N3P4 AC006326.1-201ENST00000445465 787 ntBASIC6.48□□□□□ -1.37
VPS8Q8N3P4 IFITM8P-201ENST00000522529 394 ntBASIC6.48□□□□□ -1.37
VPS8Q8N3P4 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.48□□□□□ -1.37
VPS8Q8N3P4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC6.48□□□□□ -1.37
VPS8Q8N3P4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.48□□□□□ -1.37
VPS8Q8N3P4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VPS8Q8N3P4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VPS8Q8N3P4 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 RN7SKP227-201ENST00000364445 330 ntBASIC6.47□□□□□ -1.37
VPS8Q8N3P4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 AP000357.1-201ENST00000409926 1165 ntBASIC6.47□□□□□ -1.37
VPS8Q8N3P4 RNA5SP146-201ENST00000410743 123 ntBASIC6.47□□□□□ -1.37
VPS8Q8N3P4 RN7SKP97-201ENST00000410966 333 ntBASIC6.47□□□□□ -1.37
VPS8Q8N3P4 CASKP1-201ENST00000412870 582 ntBASIC6.47□□□□□ -1.37
VPS8Q8N3P4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 TBCAP1-201ENST00000436520 327 ntBASIC6.47□□□□□ -1.37
VPS8Q8N3P4 RPL38P1-201ENST00000460914 211 ntBASIC6.47□□□□□ -1.37
VPS8Q8N3P4 RPL7P1-201ENST00000468161 747 ntBASIC6.47□□□□□ -1.37
VPS8Q8N3P4 RPL7P9-201ENST00000468715 747 ntBASIC6.47□□□□□ -1.37
VPS8Q8N3P4 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 MTND1P6-201ENST00000523621 946 ntBASIC6.47□□□□□ -1.37
VPS8Q8N3P4 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 VN1R85P-201ENST00000601587 426 ntBASIC6.47□□□□□ -1.37
VPS8Q8N3P4 MIR7702-201ENST00000621931 59 ntBASIC6.47□□□□□ -1.37
VPS8Q8N3P4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
VPS8Q8N3P4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC6.46□□□□□ -1.37
VPS8Q8N3P4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.37
VPS8Q8N3P4 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.46□□□□□ -1.38
VPS8Q8N3P4 AC108032.1-201ENST00000416706 207 ntBASIC6.46□□□□□ -1.38
VPS8Q8N3P4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.46□□□□□ -1.38
VPS8Q8N3P4 YY1P1-201ENST00000427625 668 ntBASIC6.46□□□□□ -1.38
VPS8Q8N3P4 AL117339.2-201ENST00000430475 180 ntBASIC6.46□□□□□ -1.38
VPS8Q8N3P4 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.46□□□□□ -1.38
VPS8Q8N3P4 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.46□□□□□ -1.38
VPS8Q8N3P4 AC026402.1-201ENST00000513642 170 ntBASIC6.46□□□□□ -1.38
VPS8Q8N3P4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.46□□□□□ -1.38
VPS8Q8N3P4 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
VPS8Q8N3P4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.46□□□□□ -1.38
VPS8Q8N3P4 BNIP3P5-201ENST00000562290 498 ntBASIC6.46□□□□□ -1.38
VPS8Q8N3P4 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.46□□□□□ -1.38
VPS8Q8N3P4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
VPS8Q8N3P4 AP005264.7-201ENST00000625003 745 ntBASIC6.46□□□□□ -1.38
VPS8Q8N3P4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
VPS8Q8N3P4 CASC19-261ENST00000641853 1638 ntBASIC6.46□□□□□ -1.38
VPS8Q8N3P4 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
VPS8Q8N3P4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
VPS8Q8N3P4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC6.45□□□□□ -1.38
VPS8Q8N3P4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VPS8Q8N3P4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
VPS8Q8N3P4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC6.45□□□□□ -1.38
VPS8Q8N3P4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
VPS8Q8N3P4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
VPS8Q8N3P4 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms