Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 MIR3118-1-201ENST00000581787 76 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC092032.1-201ENST00000603090 165 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC121334.2-201ENST00000605387 271 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC062037.2-201ENST00000610137 73 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 FAM157A-202ENST00000615155 405 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC137590.2-201ENST00000619709 240 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC087894.3-201ENST00000623682 349 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC138627.2-201ENST00000624202 601 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC034111.1-201ENST00000562143 3770 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 Y_RNA.5-201ENST00000362334 102 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 RNA5SP114-201ENST00000363780 113 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 RNU6-606P-201ENST00000384721 111 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AL590762.1-201ENST00000391782 432 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 MIR548M-201ENST00000408260 86 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 RNU6-193P-201ENST00000410977 107 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 METTL15P3-201ENST00000415522 1221 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 CYP4F32P-201ENST00000426492 504 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AC119618.1-201ENST00000434191 222 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 SLC25A18P1-201ENST00000449385 454 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 GAPDHP53-201ENST00000458397 924 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 RNU7-136P-201ENST00000458819 69 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 RN7SL267P-201ENST00000485107 261 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AC106872.2-201ENST00000494303 480 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 MRPL57P6-201ENST00000506570 309 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 RPL7P20-201ENST00000520308 745 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 OR5M6P-201ENST00000530227 937 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 OR4T1P-201ENST00000554933 911 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AC092332.1-201ENST00000563684 829 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AC053481.3-201ENST00000577881 843 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AC100812.1-201ENST00000607622 580 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 OR10AB1P-201ENST00000609613 938 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AL161420.1-201ENST00000619393 264 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AC007546.1-201ENST00000619452 559 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AC012629.3-201ENST00000623397 328 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AP003175.1-201ENST00000641383 6658 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 AC130360.2-201ENST00000533477 1556 ntBASIC7.42□□□□□ -1.22
SCUBE3Q8IX30 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCUBE3Q8IX30 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms