Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC073346.2-201ENST00000624724 2058 ntBASIC2.9□□□□□ -1.94
CSMD3Q7Z407 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC2.9□□□□□ -1.94
CSMD3Q7Z407 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
CSMD3Q7Z407 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CSMD3Q7Z407 FAP-203ENST00000443424 2598 ntTSL 2 BASIC2.9□□□□□ -1.94
CSMD3Q7Z407 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 VN1R51P-201ENST00000411675 945 ntBASIC2.9□□□□□ -1.95
CSMD3Q7Z407 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 AL358472.1-201ENST00000431295 329 ntBASIC2.9□□□□□ -1.95
CSMD3Q7Z407 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 RPS11P1-201ENST00000451072 473 ntBASIC2.9□□□□□ -1.95
CSMD3Q7Z407 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 ATP1B1P1-201ENST00000509767 915 ntBASIC2.9□□□□□ -1.95
CSMD3Q7Z407 NDUFA5P2-201ENST00000519723 344 ntBASIC2.9□□□□□ -1.95
CSMD3Q7Z407 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 RNA5SP513-201ENST00000364648 118 ntBASIC2.9□□□□□ -1.95
CSMD3Q7Z407 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 AC093853.1-201ENST00000515689 483 ntBASIC2.9□□□□□ -1.95
CSMD3Q7Z407 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC2.9□□□□□ -1.95
CSMD3Q7Z407 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AP000473.2-201ENST00000602659 1537 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 SNORA70.6-201ENST00000383934 134 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 MTND4LP20-201ENST00000402379 270 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AC008155.2-201ENST00000464337 397 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 RPL35AP15-201ENST00000468042 339 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AL450472.3-201ENST00000615578 367 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 MFSD8-242ENST00000641690 4199 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 RNVU1-14-201ENST00000384770 164 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AMMECR1LP1-201ENST00000415152 841 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 CREM-220ENST00000463314 964 ntTSL 2 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AC090686.1-201ENST00000481577 749 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 NPM1P21-201ENST00000513394 762 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 NXPH1-205ENST00000602349 1953 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 RPL6P9-201ENST00000466502 859 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AC128716.1-201ENST00000475129 166 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AP000563.1-201ENST00000490865 758 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 SETP14-201ENST00000497538 873 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AC037471.2-201ENST00000564941 598 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 MIR4325-201ENST00000583049 90 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AC107294.1-201ENST00000609524 467 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 AC007546.2-201ENST00000623996 360 ntBASIC2.89□□□□□ -1.95
CSMD3Q7Z407 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD3Q7Z407 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms