Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 HNRNPA1P54-201ENST00000411857 9714 ntBASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 AC062016.2-201ENST00000420950 676 ntBASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 VTI1BP4-201ENST00000427516 527 ntBASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 DDX39BP2-208ENST00000453923 258 ntBASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 SETP6-201ENST00000479329 568 ntBASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 RN7SL812P-201ENST00000493791 279 ntBASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 AC073530.2-201ENST00000623987 261 ntBASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 ZNF833P-201ENST00000424938 1494 ntBASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 AC073346.2-201ENST00000624724 2058 ntBASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS13DQ5THJ4 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AL121878.1-201ENST00000418638 859 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 UBE2DNL-203ENST00000474922 222 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 SETP14-201ENST00000497538 873 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AC107016.1-201ENST00000550463 337 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AC074029.4-201ENST00000624796 1859 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 OR56B2P-201ENST00000317102 954 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 SNORD66.1-201ENST00000391230 76 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 RNA5SP497-201ENST00000516081 97 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AC079587.1-201ENST00000603846 277 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AC005000.2-201ENST00000605468 310 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AC005972.3-201ENST00000606304 481 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 MIR1179-201ENST00000408703 91 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 CTSL3P-202ENST00000412179 788 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 MORF4L2P1-201ENST00000503761 858 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AC009852.2-201ENST00000567898 485 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AC015967.1-201ENST00000619893 476 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AC097461.1-201ENST00000568928 2821 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 CYCSP53-201ENST00000455540 265 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 RPS3AP6-201ENST00000484430 795 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AC110792.1-201ENST00000491826 472 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AC074250.1-201ENST00000511117 192 ntBASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS13DQ5THJ4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms