Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC234781.3-201ENST00000452540 973 ntBASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 RPL7P45-201ENST00000455851 743 ntBASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 RPS3AP41-201ENST00000462701 778 ntBASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 RN7SL459P-201ENST00000481078 302 ntBASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 AC105233.1-201ENST00000498840 781 ntBASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 PRELID3BP6-201ENST00000503839 571 ntBASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 MYL12BP2-201ENST00000503948 512 ntBASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 AC008083.2-201ENST00000546707 476 ntBASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 AC006349.1-201ENST00000555526 235 ntBASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 MIR548Y-201ENST00000582739 110 ntBASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 RN7SL622P-201ENST00000585292 275 ntBASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 CCDC58P3-201ENST00000590792 430 ntBASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 AC006116.3-201ENST00000592968 361 ntBASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 AC083809.1-201ENST00000615051 472 ntBASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 uc_338.9-201ENST00000617424 182 ntBASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 MIR6839-201ENST00000620425 113 ntBASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 VN2R3P-201ENST00000422626 1412 ntBASIC4.37□□□□□ -1.71
PDLIM3Q53GG5 AC000123.3-201ENST00000624029 4975 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 MAPK10-320ENST00000641462 6696 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 RN7SKP28-201ENST00000364770 305 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 MIR551A-201ENST00000385042 96 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AL603865.2-201ENST00000401679 213 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 MTATP6P31-201ENST00000406985 692 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AC093422.3-201ENST00000428506 305 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AC073069.1-201ENST00000428657 441 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 MTCO1P52-201ENST00000433928 531 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AL138878.2-201ENST00000440581 1241 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AL035090.1-201ENST00000454835 332 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 TVP23BP2-201ENST00000455082 615 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AC103987.1-201ENST00000473394 348 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 RPS17P11-201ENST00000474297 293 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AL161747.1-201ENST00000480068 358 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 RNU6-513P-201ENST00000516104 104 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AP003717.3-201ENST00000544832 1180 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AC025260.1-201ENST00000548858 430 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 PARP1P2-201ENST00000556806 195 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AL109741.3-201ENST00000561748 592 ntBASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.36□□□□□ -1.71
PDLIM3Q53GG5 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms