Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL391219.1-201ENST00000422570 483 ntBASIC3.88□□□□□ -1.79
UBA52P62987 RPL23AP1-201ENST00000428990 471 ntBASIC3.88□□□□□ -1.79
UBA52P62987 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
UBA52P62987 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.88□□□□□ -1.79
UBA52P62987 AL451139.1-201ENST00000434718 346 ntBASIC3.88□□□□□ -1.79
UBA52P62987 RPSAP41-201ENST00000439695 860 ntBASIC3.88□□□□□ -1.79
UBA52P62987 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC3.88□□□□□ -1.79
UBA52P62987 EIF2S2P2-201ENST00000447161 982 ntBASIC3.88□□□□□ -1.79
UBA52P62987 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC3.88□□□□□ -1.79
UBA52P62987 AL133477.1-201ENST00000457472 514 ntBASIC3.88□□□□□ -1.79
UBA52P62987 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.88□□□□□ -1.79
UBA52P62987 RPS26P15-201ENST00000488067 348 ntBASIC3.88□□□□□ -1.79
UBA52P62987 SCARNA22-201ENST00000503991 125 ntBASIC3.88□□□□□ -1.79
UBA52P62987 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.88□□□□□ -1.79
UBA52P62987 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.88□□□□□ -1.79
UBA52P62987 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.88□□□□□ -1.79
UBA52P62987 RNA5SP446-201ENST00000515955 82 ntBASIC3.88□□□□□ -1.79
UBA52P62987 AP002981.1-201ENST00000517692 975 ntBASIC3.88□□□□□ -1.79
UBA52P62987 IGLVIV-53-201ENST00000520107 367 ntBASIC3.88□□□□□ -1.79
UBA52P62987 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.88□□□□□ -1.79
UBA52P62987 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
UBA52P62987 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
UBA52P62987 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
UBA52P62987 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.88□□□□□ -1.79
UBA52P62987 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.88□□□□□ -1.79
UBA52P62987 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.88□□□□□ -1.79
UBA52P62987 AP000919.1-201ENST00000582850 985 ntBASIC3.88□□□□□ -1.79
UBA52P62987 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.88□□□□□ -1.79
UBA52P62987 AC020910.2-201ENST00000603635 610 ntBASIC3.88□□□□□ -1.79
UBA52P62987 AL590392.1-201ENST00000604960 446 ntBASIC3.88□□□□□ -1.79
UBA52P62987 AL356218.2-201ENST00000605264 187 ntBASIC3.88□□□□□ -1.79
UBA52P62987 AC092653.1-201ENST00000608509 531 ntBASIC3.88□□□□□ -1.79
UBA52P62987 AC007497.1-201ENST00000610421 561 ntBASIC3.88□□□□□ -1.79
UBA52P62987 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
UBA52P62987 MIR6830-201ENST00000636015 70 ntBASIC3.88□□□□□ -1.79
UBA52P62987 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
UBA52P62987 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.88□□□□□ -1.79
UBA52P62987 AL355852.1-201ENST00000454081 1771 ntBASIC3.88□□□□□ -1.79
UBA52P62987 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
UBA52P62987 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.88□□□□□ -1.79
UBA52P62987 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.88□□□□□ -1.79
UBA52P62987 AL137100.1-201ENST00000556703 1620 ntBASIC3.88□□□□□ -1.79
UBA52P62987 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UBA52P62987 MFSD8-220ENST00000641243 1422 ntBASIC3.87□□□□□ -1.79
UBA52P62987 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
UBA52P62987 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
UBA52P62987 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.87□□□□□ -1.79
UBA52P62987 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
UBA52P62987 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UBA52P62987 FAM3C2-201ENST00000312214 681 ntBASIC3.87□□□□□ -1.79
UBA52P62987 RNA5SP502-201ENST00000362694 119 ntBASIC3.87□□□□□ -1.79
UBA52P62987 SNORD113.2-201ENST00000364166 89 ntBASIC3.87□□□□□ -1.79
UBA52P62987 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
UBA52P62987 U3.22-201ENST00000391120 215 ntBASIC3.87□□□□□ -1.79
UBA52P62987 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UBA52P62987 ZNF603P-201ENST00000405613 487 ntBASIC3.87□□□□□ -1.79
UBA52P62987 AC234781.4-201ENST00000419384 244 ntBASIC3.87□□□□□ -1.79
UBA52P62987 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.87□□□□□ -1.79
UBA52P62987 RPL7P57-201ENST00000423238 740 ntBASIC3.87□□□□□ -1.79
UBA52P62987 CHIAP3-201ENST00000423668 1133 ntBASIC3.87□□□□□ -1.79
UBA52P62987 RPL21P91-201ENST00000429231 479 ntBASIC3.87□□□□□ -1.79
UBA52P62987 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.87□□□□□ -1.79
UBA52P62987 ELOCP8-201ENST00000439309 332 ntBASIC3.87□□□□□ -1.79
UBA52P62987 ELOCP15-201ENST00000442090 332 ntBASIC3.87□□□□□ -1.79
UBA52P62987 HMGB1P16-201ENST00000447155 540 ntBASIC3.87□□□□□ -1.79
UBA52P62987 AC013356.1-201ENST00000489027 564 ntBASIC3.87□□□□□ -1.79
UBA52P62987 AC083829.1-201ENST00000503756 657 ntBASIC3.87□□□□□ -1.79
UBA52P62987 AK4P6-201ENST00000505168 528 ntBASIC3.87□□□□□ -1.79
UBA52P62987 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.87□□□□□ -1.79
UBA52P62987 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.87□□□□□ -1.79
UBA52P62987 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.87□□□□□ -1.79
UBA52P62987 RNU2-30P-201ENST00000516209 141 ntBASIC3.87□□□□□ -1.79
UBA52P62987 BUD31P1-201ENST00000521828 359 ntBASIC3.87□□□□□ -1.79
UBA52P62987 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.87□□□□□ -1.79
UBA52P62987 AC133555.2-201ENST00000550213 292 ntBASIC3.87□□□□□ -1.79
UBA52P62987 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.87□□□□□ -1.79
UBA52P62987 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.87□□□□□ -1.79
UBA52P62987 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.87□□□□□ -1.79
UBA52P62987 RPL12P25-202ENST00000598100 674 ntBASIC3.87□□□□□ -1.79
UBA52P62987 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.87□□□□□ -1.79
UBA52P62987 AC025946.2-201ENST00000603398 234 ntBASIC3.87□□□□□ -1.79
UBA52P62987 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.87□□□□□ -1.79
UBA52P62987 MLECP1-201ENST00000615893 709 ntBASIC3.87□□□□□ -1.79
UBA52P62987 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.87□□□□□ -1.79
UBA52P62987 AC233309.1-201ENST00000619522 751 ntBASIC3.87□□□□□ -1.79
UBA52P62987 AL359715.5-201ENST00000623431 443 ntBASIC3.87□□□□□ -1.79
UBA52P62987 AC011815.3-201ENST00000624194 473 ntBASIC3.87□□□□□ -1.79
UBA52P62987 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UBA52P62987 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
UBA52P62987 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
UBA52P62987 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UBA52P62987 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.87□□□□□ -1.79
UBA52P62987 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
UBA52P62987 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
UBA52P62987 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
UBA52P62987 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.87□□□□□ -1.79
UBA52P62987 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UBA52P62987 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UBA52P62987 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.86□□□□□ -1.79
UBA52P62987 AC008758.3-201ENST00000507003 1829 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms