Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBE2D3P61077 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBE2D3P61077 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.12□□□□□ -1.91
UBE2D3P61077 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
UBE2D3P61077 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UBE2D3P61077 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBE2D3P61077 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UBE2D3P61077 AC103591.2-201ENST00000265259 766 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
UBE2D3P61077 MIR105-2-201ENST00000385083 81 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 RNA5SP397-201ENST00000391323 118 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
UBE2D3P61077 EIF4A1P3-201ENST00000411521 244 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.12□□□□□ -1.91
UBE2D3P61077 RPS6P12-201ENST00000432491 726 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.12□□□□□ -1.91
UBE2D3P61077 AC008072.1-201ENST00000434254 824 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.12□□□□□ -1.91
UBE2D3P61077 AF228730.2-201ENST00000438784 848 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 RPL23AP43-201ENST00000446445 471 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.12□□□□□ -1.91
UBE2D3P61077 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.12□□□□□ -1.91
UBE2D3P61077 RPS3AP53-201ENST00000454716 778 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 AC018638.3-201ENST00000461273 132 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 RN7SL329P-201ENST00000467740 299 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.12□□□□□ -1.91
UBE2D3P61077 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.12□□□□□ -1.91
UBE2D3P61077 OR5M2P-201ENST00000529003 936 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 BRD9P1-201ENST00000529855 560 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.12□□□□□ -1.91
UBE2D3P61077 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.12□□□□□ -1.91
UBE2D3P61077 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.12□□□□□ -1.91
UBE2D3P61077 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.12□□□□□ -1.91
UBE2D3P61077 AC090312.1-201ENST00000580637 348 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.12□□□□□ -1.91
UBE2D3P61077 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.12□□□□□ -1.91
UBE2D3P61077 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBE2D3P61077 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 AP002967.1-201ENST00000624203 539 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 AC006065.6-201ENST00000625201 545 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.12□□□□□ -1.91
UBE2D3P61077 AL355480.1-201ENST00000629041 99 ntBASIC3.12□□□□□ -1.91
UBE2D3P61077 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.12□□□□□ -1.91
UBE2D3P61077 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.12□□□□□ -1.91
UBE2D3P61077 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBE2D3P61077 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBE2D3P61077 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
UBE2D3P61077 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.12□□□□□ -1.91
UBE2D3P61077 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
UBE2D3P61077 AC134882.1-201ENST00000603738 1676 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
UBE2D3P61077 AC008725.1-201ENST00000605123 2263 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 RNA5SP388-201ENST00000362584 119 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
UBE2D3P61077 RNA5SP87-201ENST00000384155 118 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 AL590609.2-201ENST00000421430 368 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 ARAFP1-201ENST00000422172 605 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 NPM1P26-201ENST00000426339 738 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 AC104837.2-201ENST00000427236 424 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.11□□□□□ -1.91
UBE2D3P61077 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.11□□□□□ -1.91
UBE2D3P61077 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.11□□□□□ -1.91
UBE2D3P61077 PRELID3BP10-201ENST00000431957 584 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.11□□□□□ -1.91
UBE2D3P61077 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.11□□□□□ -1.91
UBE2D3P61077 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.11□□□□□ -1.91
UBE2D3P61077 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.11□□□□□ -1.91
UBE2D3P61077 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.11□□□□□ -1.91
UBE2D3P61077 RPS27AP17-201ENST00000463344 455 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UBE2D3P61077 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UBE2D3P61077 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBE2D3P61077 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.11□□□□□ -1.91
UBE2D3P61077 PHBP17-201ENST00000528576 541 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
UBE2D3P61077 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.11□□□□□ -1.91
UBE2D3P61077 RFPL1S-203ENST00000539579 330 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 AC135001.1-201ENST00000544546 283 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 AC044860.2-201ENST00000561005 179 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 AC009101.1-201ENST00000568135 242 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 RN7SL753P-201ENST00000581238 290 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.11□□□□□ -1.91
UBE2D3P61077 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.11□□□□□ -1.91
UBE2D3P61077 AC012603.1-201ENST00000606424 528 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 AC090510.2-201ENST00000617465 629 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.11□□□□□ -1.91
UBE2D3P61077 OR2L1P-202ENST00000641567 1023 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UBE2D3P61077 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBE2D3P61077 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
UBE2D3P61077 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
UBE2D3P61077 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBE2D3P61077 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.11□□□□□ -1.91
UBE2D3P61077 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.11□□□□□ -1.91
UBE2D3P61077 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.11□□□□□ -1.91
UBE2D3P61077 MTND4P10-201ENST00000446199 1363 ntBASIC3.11□□□□□ -1.91
UBE2D3P61077 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms