Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.17□□□□□ -1.58
CLRN1P58418 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC5.17□□□□□ -1.58
CLRN1P58418 SAMMSON-209ENST00000641222 1100 ntBASIC5.17□□□□□ -1.58
CLRN1P58418 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CLRN1P58418 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLRN1P58418 MFSD8-219ENST00000641228 2559 ntBASIC5.17□□□□□ -1.58
CLRN1P58418 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.17□□□□□ -1.58
CLRN1P58418 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLRN1P58418 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLRN1P58418 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLRN1P58418 GTF2IP4-201ENST00000453092 2054 ntBASIC5.17□□□□□ -1.58
CLRN1P58418 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLRN1P58418 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLRN1P58418 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLRN1P58418 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
CLRN1P58418 AL034546.1-201ENST00000623740 3693 ntBASIC5.17□□□□□ -1.58
CLRN1P58418 AL022311.1-201ENST00000623726 19416 ntBASIC5.17□□□□□ -1.58
CLRN1P58418 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLRN1P58418 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.16□□□□□ -1.58
CLRN1P58418 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLRN1P58418 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLRN1P58418 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
CLRN1P58418 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLRN1P58418 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
CLRN1P58418 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLRN1P58418 AP000432.2-201ENST00000624164 2048 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLRN1P58418 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLRN1P58418 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLRN1P58418 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLRN1P58418 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLRN1P58418 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CLRN1P58418 AC068870.3-201ENST00000625077 2536 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLRN1P58418 RNU6-660P-201ENST00000364566 109 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 RN7SKP78-201ENST00000364711 318 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 RN7SKP187-201ENST00000365536 330 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLRN1P58418 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.16□□□□□ -1.58
CLRN1P58418 RNU6-317P-201ENST00000384031 107 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 AC004386.1-201ENST00000393214 761 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 TMSB4XP8-201ENST00000402089 135 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CLRN1P58418 AC022028.1-201ENST00000412054 408 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 AC007899.1-201ENST00000412776 775 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.16□□□□□ -1.58
CLRN1P58418 TMSB4XP6-201ENST00000415187 135 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 RPL23AP39-201ENST00000415533 405 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 TMSB4XP1-201ENST00000424567 135 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.16□□□□□ -1.58
CLRN1P58418 TMX2P1-201ENST00000436507 708 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 Z74696.2-201ENST00000436514 498 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 MTATP6P13-201ENST00000438531 667 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 AL357520.1-201ENST00000441557 453 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.16□□□□□ -1.58
CLRN1P58418 BMI1P1-201ENST00000445879 941 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 OR7E116P-201ENST00000448529 957 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.16□□□□□ -1.58
CLRN1P58418 RPL12P39-201ENST00000455456 496 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 RN7SL168P-201ENST00000463821 279 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.16□□□□□ -1.58
CLRN1P58418 AP002884.1-201ENST00000479691 655 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.16□□□□□ -1.58
CLRN1P58418 AC079841.1-201ENST00000481228 950 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLRN1P58418 RN7SL193P-201ENST00000491708 276 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.16□□□□□ -1.58
CLRN1P58418 AC006499.5-201ENST00000505037 514 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.16□□□□□ -1.58
CLRN1P58418 AC010285.3-201ENST00000511668 676 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 HMGB1P42-201ENST00000532126 553 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.16□□□□□ -1.58
CLRN1P58418 AC125612.1-201ENST00000547580 377 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.16□□□□□ -1.58
CLRN1P58418 AC245505.1-201ENST00000556398 224 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.16□□□□□ -1.58
CLRN1P58418 AL512347.1-201ENST00000566420 503 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 MTND1P15-201ENST00000579262 949 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.16□□□□□ -1.58
CLRN1P58418 MIR4260-201ENST00000583107 67 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.16□□□□□ -1.58
CLRN1P58418 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.16□□□□□ -1.58
CLRN1P58418 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.16□□□□□ -1.58
CLRN1P58418 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
CLRN1P58418 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.16□□□□□ -1.58
CLRN1P58418 AC108747.1-201ENST00000609508 535 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 uc_338.9-201ENST00000617424 182 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLRN1P58418 AC091932.2-201ENST00000623014 291 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.16□□□□□ -1.58
CLRN1P58418 AC068137.3-201ENST00000639191 341 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 AC073869.6-201ENST00000640656 341 ntBASIC5.16□□□□□ -1.58
CLRN1P58418 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CLRN1P58418 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.16□□□□□ -1.58
CLRN1P58418 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLRN1P58418 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLRN1P58418 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.16□□□□□ -1.58
CLRN1P58418 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CLRN1P58418 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CLRN1P58418 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms