Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC092638.1-201ENST00000411966 1275 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.03□□□□□ -1.6
NR1H2P55055 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.03□□□□□ -1.6
NR1H2P55055 AL662874.1-201ENST00000426065 230 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 MTCYBP15-201ENST00000433123 1127 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 AC023347.2-201ENST00000433994 462 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.03□□□□□ -1.6
NR1H2P55055 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.03□□□□□ -1.6
NR1H2P55055 AC005297.1-201ENST00000444765 862 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 AL450996.1-201ENST00000445574 1202 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.03□□□□□ -1.6
NR1H2P55055 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.03□□□□□ -1.6
NR1H2P55055 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.03□□□□□ -1.6
NR1H2P55055 AC096992.1-201ENST00000459808 709 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 RN7SL610P-201ENST00000463845 291 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 RN7SL799P-201ENST00000475891 298 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.03□□□□□ -1.6
NR1H2P55055 RPL32P9-201ENST00000487963 407 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NR1H2P55055 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NR1H2P55055 ARL4AP1-201ENST00000503220 705 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.03□□□□□ -1.6
NR1H2P55055 AC008837.1-201ENST00000511513 412 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.03□□□□□ -1.6
NR1H2P55055 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.03□□□□□ -1.6
NR1H2P55055 BX510359.5-201ENST00000515651 304 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 SCARNA6.1-201ENST00000516989 238 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 RNU6-1028P-201ENST00000517164 93 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 SNORA43.3-201ENST00000517240 103 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.03□□□□□ -1.6
NR1H2P55055 NRBF2P4-201ENST00000520874 850 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.03□□□□□ -1.6
NR1H2P55055 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.03□□□□□ -1.6
NR1H2P55055 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NR1H2P55055 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.03□□□□□ -1.6
NR1H2P55055 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.03□□□□□ -1.6
NR1H2P55055 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.03□□□□□ -1.6
NR1H2P55055 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.03□□□□□ -1.6
NR1H2P55055 MIR1269B-201ENST00000580405 75 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 AC011477.5-201ENST00000586571 259 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NR1H2P55055 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.03□□□□□ -1.6
NR1H2P55055 AC093765.1-201ENST00000603758 881 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 AC073387.2-201ENST00000604797 784 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 AC008115.3-201ENST00000614874 549 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NR1H2P55055 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.03□□□□□ -1.6
NR1H2P55055 CU639417.4-201ENST00000623928 207 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 OR11H2-202ENST00000641517 1085 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.03□□□□□ -1.6
NR1H2P55055 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NR1H2P55055 SAGE2P-201ENST00000420011 2126 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NR1H2P55055 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NR1H2P55055 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
NR1H2P55055 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.03□□□□□ -1.6
NR1H2P55055 C4BPAP1-201ENST00000415474 1893 ntBASIC5.03□□□□□ -1.6
NR1H2P55055 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.02□□□□□ -1.61
NR1H2P55055 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.02□□□□□ -1.61
NR1H2P55055 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NR1H2P55055 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NR1H2P55055 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NR1H2P55055 RN7SKP162-201ENST00000363605 345 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 SNORA58B-201ENST00000364259 136 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NR1H2P55055 MIR937-201ENST00000401271 86 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 RN7SKP199-201ENST00000410325 305 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.02□□□□□ -1.61
NR1H2P55055 NPM1P4-201ENST00000414095 812 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.02□□□□□ -1.61
NR1H2P55055 TAF13P2-201ENST00000416876 286 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.02□□□□□ -1.61
NR1H2P55055 USP9YP21-201ENST00000420603 432 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 AC007394.1-201ENST00000421941 531 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.02□□□□□ -1.61
NR1H2P55055 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.02□□□□□ -1.61
NR1H2P55055 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.02□□□□□ -1.61
NR1H2P55055 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.02□□□□□ -1.61
NR1H2P55055 RRM2P4-201ENST00000441721 562 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 AL163193.1-201ENST00000444895 788 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.02□□□□□ -1.61
NR1H2P55055 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.02□□□□□ -1.61
NR1H2P55055 AC011225.1-201ENST00000457751 369 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 RNU7-140P-201ENST00000459546 60 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 AP000942.1-201ENST00000463969 747 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 RPL6P9-201ENST00000466502 859 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.02□□□□□ -1.61
NR1H2P55055 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.02□□□□□ -1.61
NR1H2P55055 UBA52P3-201ENST00000491303 382 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 RN7SL447P-201ENST00000494711 245 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.02□□□□□ -1.61
NR1H2P55055 RPL30P11-201ENST00000495304 339 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 AC073358.1-201ENST00000505671 684 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.02□□□□□ -1.61
NR1H2P55055 SNORD116-26-201ENST00000516006 96 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 SNORA19.3-201ENST00000516165 130 ntBASIC5.02□□□□□ -1.61
NR1H2P55055 RN7SKP96-201ENST00000516948 297 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms