Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
EPHA4P54764 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.66□□□□□ -1.34
EPHA4P54764 AC104237.2-201ENST00000612456 443 ntBASIC6.66□□□□□ -1.34
EPHA4P54764 AC233309.1-201ENST00000619522 751 ntBASIC6.66□□□□□ -1.34
EPHA4P54764 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.66□□□□□ -1.34
EPHA4P54764 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.66□□□□□ -1.34
EPHA4P54764 ATM-228ENST00000639240 498 ntTSL 5 BASIC6.66□□□□□ -1.34
EPHA4P54764 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
EPHA4P54764 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
EPHA4P54764 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.66□□□□□ -1.34
EPHA4P54764 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
EPHA4P54764 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
EPHA4P54764 AL133243.4-201ENST00000623116 3109 ntBASIC6.66□□□□□ -1.34
EPHA4P54764 DLEU2L-201ENST00000371086 3555 ntBASIC6.66□□□□□ -1.34
EPHA4P54764 TCP11X1-202ENST00000622971 1372 ntBASIC6.66□□□□□ -1.34
EPHA4P54764 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.66□□□□□ -1.34
EPHA4P54764 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
EPHA4P54764 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
EPHA4P54764 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
EPHA4P54764 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.66□□□□□ -1.34
EPHA4P54764 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
EPHA4P54764 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
EPHA4P54764 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.66□□□□□ -1.34
EPHA4P54764 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
EPHA4P54764 AC105074.1-201ENST00000623380 3095 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.65□□□□□ -1.34
EPHA4P54764 TMEM75-201ENST00000624314 2165 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 AP002800.1-201ENST00000624982 2225 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
EPHA4P54764 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
EPHA4P54764 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
EPHA4P54764 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
EPHA4P54764 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.65□□□□□ -1.34
EPHA4P54764 Y_RNA.128-201ENST00000363391 112 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 Y_RNA.144-201ENST00000363521 113 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 RNU6-1097P-201ENST00000363586 107 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 RN7SKP47-201ENST00000365347 328 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 RNU6-1158P-201ENST00000391167 107 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.65□□□□□ -1.34
EPHA4P54764 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC6.65□□□□□ -1.34
EPHA4P54764 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
EPHA4P54764 SETP9-201ENST00000423837 832 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
EPHA4P54764 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.65□□□□□ -1.34
EPHA4P54764 RBMY2QP-201ENST00000429799 1147 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 AC010881.1-201ENST00000433830 235 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 IFNA20P-201ENST00000436840 528 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.65□□□□□ -1.34
EPHA4P54764 RPS10P18-201ENST00000442662 495 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 FAM103A2P-201ENST00000444122 354 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 RPL23AP15-201ENST00000450202 459 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 KF459542.1-201ENST00000450908 553 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 RPS20P32-201ENST00000456044 356 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 RNU7-63P-201ENST00000459054 62 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 UBA52P3-201ENST00000491303 382 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.65□□□□□ -1.34
EPHA4P54764 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.65□□□□□ -1.34
EPHA4P54764 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6.65□□□□□ -1.34
EPHA4P54764 OR4R1P-201ENST00000529879 463 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 OR5B19P-201ENST00000531766 928 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.65□□□□□ -1.34
EPHA4P54764 NPM1P42-201ENST00000560329 862 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.65□□□□□ -1.34
EPHA4P54764 ULK4P1-202ENST00000565174 503 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
EPHA4P54764 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.65□□□□□ -1.34
EPHA4P54764 AC010525.2-201ENST00000590920 195 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 AC139493.1-201ENST00000604368 397 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 AC106900.2-201ENST00000604994 317 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 AC004908.1-201ENST00000606572 541 ntBASIC6.65□□□□□ -1.34
EPHA4P54764 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.65□□□□□ -1.34
EPHA4P54764 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.65□□□□□ -1.34
EPHA4P54764 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.65□□□□□ -1.34
EPHA4P54764 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.65□□□□□ -1.34
EPHA4P54764 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
EPHA4P54764 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.65□□□□□ -1.35
EPHA4P54764 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
EPHA4P54764 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.35
EPHA4P54764 RBPJP6-201ENST00000411556 1431 ntBASIC6.65□□□□□ -1.35
EPHA4P54764 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
EPHA4P54764 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
EPHA4P54764 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
EPHA4P54764 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
EPHA4P54764 AC022819.1-201ENST00000563495 3910 ntBASIC6.65□□□□□ -1.35
EPHA4P54764 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
EPHA4P54764 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.65□□□□□ -1.35
EPHA4P54764 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
EPHA4P54764 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 USP9YP4-201ENST00000424401 1745 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 NUP58P1-201ENST00000502546 1738 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.64□□□□□ -1.35
EPHA4P54764 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 AC020658.2-201ENST00000559030 4020 ntBASIC6.64□□□□□ -1.35
EPHA4P54764 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
EPHA4P54764 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms