Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.69□□□□□ -1.66
PDX1P52945 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.69□□□□□ -1.66
PDX1P52945 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDX1P52945 GLRXP2-201ENST00000555594 321 ntBASIC4.69□□□□□ -1.66
PDX1P52945 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.69□□□□□ -1.66
PDX1P52945 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.69□□□□□ -1.66
PDX1P52945 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.69□□□□□ -1.66
PDX1P52945 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.69□□□□□ -1.66
PDX1P52945 AC011458.1-201ENST00000604034 617 ntBASIC4.69□□□□□ -1.66
PDX1P52945 AC025175.1-201ENST00000606482 759 ntBASIC4.69□□□□□ -1.66
PDX1P52945 AC018645.2-201ENST00000609151 472 ntBASIC4.69□□□□□ -1.66
PDX1P52945 AC110792.4-201ENST00000609843 298 ntBASIC4.69□□□□□ -1.66
PDX1P52945 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDX1P52945 AL049777.1-201ENST00000622740 518 ntBASIC4.69□□□□□ -1.66
PDX1P52945 AL138955.1-201ENST00000622881 1040 ntBASIC4.69□□□□□ -1.66
PDX1P52945 AC068880.4-201ENST00000623082 495 ntBASIC4.69□□□□□ -1.66
PDX1P52945 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
PDX1P52945 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDX1P52945 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.69□□□□□ -1.66
PDX1P52945 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDX1P52945 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDX1P52945 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDX1P52945 NCLP2-201ENST00000416078 1462 ntBASIC4.69□□□□□ -1.66
PDX1P52945 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDX1P52945 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDX1P52945 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PDX1P52945 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDX1P52945 KARSP3-201ENST00000571212 1504 ntBASIC4.68□□□□□ -1.66
PDX1P52945 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDX1P52945 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PDX1P52945 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDX1P52945 AL357515.1-201ENST00000402967 542 ntBASIC4.68□□□□□ -1.66
PDX1P52945 AL034374.1-201ENST00000406329 351 ntBASIC4.68□□□□□ -1.66
PDX1P52945 RNU2-17P-201ENST00000410290 190 ntBASIC4.68□□□□□ -1.66
PDX1P52945 TATDN1P1-201ENST00000414123 891 ntBASIC4.68□□□□□ -1.66
PDX1P52945 FABP7P1-201ENST00000424004 391 ntBASIC4.68□□□□□ -1.66
PDX1P52945 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.68□□□□□ -1.66
PDX1P52945 RPL23AP1-201ENST00000428990 471 ntBASIC4.68□□□□□ -1.66
PDX1P52945 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.68□□□□□ -1.66
PDX1P52945 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.68□□□□□ -1.66
PDX1P52945 RPL35AP21-201ENST00000437667 333 ntBASIC4.68□□□□□ -1.66
PDX1P52945 CACYBPP1-201ENST00000438592 684 ntBASIC4.68□□□□□ -1.66
PDX1P52945 MTCYBP12-201ENST00000440559 1134 ntBASIC4.68□□□□□ -1.66
PDX1P52945 AL096829.2-201ENST00000446582 742 ntBASIC4.68□□□□□ -1.66
PDX1P52945 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PDX1P52945 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.68□□□□□ -1.66
PDX1P52945 AL691482.1-201ENST00000453255 87 ntBASIC4.68□□□□□ -1.66
PDX1P52945 SEPT7P3-201ENST00000455017 621 ntBASIC4.68□□□□□ -1.66
PDX1P52945 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.68□□□□□ -1.66
PDX1P52945 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PDX1P52945 CAB39P1-201ENST00000502277 460 ntBASIC4.68□□□□□ -1.66
PDX1P52945 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.68□□□□□ -1.66
PDX1P52945 ENPP7P9-201ENST00000514456 627 ntBASIC4.68□□□□□ -1.66
PDX1P52945 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.68□□□□□ -1.66
PDX1P52945 AC009643.1-201ENST00000532030 391 ntBASIC4.68□□□□□ -1.66
PDX1P52945 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.68□□□□□ -1.66
PDX1P52945 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.68□□□□□ -1.66
PDX1P52945 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.68□□□□□ -1.66
PDX1P52945 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.68□□□□□ -1.66
PDX1P52945 AC104229.1-201ENST00000561364 255 ntBASIC4.68□□□□□ -1.66
PDX1P52945 AC136624.4-201ENST00000573044 370 ntBASIC4.68□□□□□ -1.66
PDX1P52945 AC007497.1-201ENST00000610421 561 ntBASIC4.68□□□□□ -1.66
PDX1P52945 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.68□□□□□ -1.66
PDX1P52945 AC009704.2-201ENST00000618739 483 ntBASIC4.68□□□□□ -1.66
PDX1P52945 AC016717.3-201ENST00000624730 554 ntBASIC4.68□□□□□ -1.66
PDX1P52945 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDX1P52945 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.68□□□□□ -1.66
PDX1P52945 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDX1P52945 AC104260.2-201ENST00000623551 3497 ntBASIC4.68□□□□□ -1.66
PDX1P52945 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDX1P52945 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PDX1P52945 MTND4P9-201ENST00000507819 1346 ntBASIC4.68□□□□□ -1.66
PDX1P52945 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PDX1P52945 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.68□□□□□ -1.66
PDX1P52945 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.67□□□□□ -1.66
PDX1P52945 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.67□□□□□ -1.66
PDX1P52945 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDX1P52945 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.67□□□□□ -1.66
PDX1P52945 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.67□□□□□ -1.66
PDX1P52945 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PDX1P52945 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDX1P52945 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDX1P52945 OR4K15-201ENST00000305051 1216 ntBASIC4.67□□□□□ -1.66
PDX1P52945 AC017079.1-201ENST00000333650 415 ntBASIC4.67□□□□□ -1.66
PDX1P52945 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDX1P52945 RNU6-532P-201ENST00000384318 107 ntBASIC4.67□□□□□ -1.66
PDX1P52945 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PDX1P52945 EI24P3-201ENST00000399046 1062 ntBASIC4.67□□□□□ -1.66
PDX1P52945 AL136131.1-201ENST00000406079 803 ntBASIC4.67□□□□□ -1.66
PDX1P52945 AC114755.2-201ENST00000413520 361 ntBASIC4.67□□□□□ -1.66
PDX1P52945 AL445183.3-201ENST00000414168 502 ntBASIC4.67□□□□□ -1.66
PDX1P52945 BX664727.1-201ENST00000416024 466 ntBASIC4.67□□□□□ -1.66
PDX1P52945 CENPIP1-201ENST00000425713 902 ntBASIC4.67□□□□□ -1.66
PDX1P52945 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.67□□□□□ -1.66
PDX1P52945 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.67□□□□□ -1.66
PDX1P52945 RPL7P55-201ENST00000450522 746 ntBASIC4.67□□□□□ -1.66
PDX1P52945 AC093166.2-201ENST00000455969 1017 ntBASIC4.67□□□□□ -1.66
PDX1P52945 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.67□□□□□ -1.66
PDX1P52945 ATP5G1P3-201ENST00000463301 410 ntBASIC4.67□□□□□ -1.66
PDX1P52945 CYCSP20-201ENST00000473154 315 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms