Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC1A1P43005 AC012020.1-201ENST00000624541 1728 ntBASIC4.58□□□□□ -1.68
SLC1A1P43005 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SLC1A1P43005 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC1A1P43005 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC1A1P43005 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC1A1P43005 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC1A1P43005 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC1A1P43005 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC1A1P43005 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
SLC1A1P43005 RNA5SP52-201ENST00000362448 134 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SLC1A1P43005 SNORD66.1-201ENST00000391230 76 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 RN7SKP278-201ENST00000410504 342 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC1A1P43005 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC1A1P43005 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.57□□□□□ -1.68
SLC1A1P43005 EIF1P3-201ENST00000423841 334 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.57□□□□□ -1.68
SLC1A1P43005 RPL12P3-201ENST00000440080 396 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC1A1P43005 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC1A1P43005 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC1A1P43005 OR6C72P-201ENST00000451403 892 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 DHFRP3-201ENST00000455595 559 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC1A1P43005 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.57□□□□□ -1.68
SLC1A1P43005 AC083982.1-201ENST00000485679 344 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 AC105233.1-201ENST00000498840 781 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 PARP4P3-201ENST00000510265 317 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 VWA8P1-201ENST00000510889 176 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC1A1P43005 OR5M7P-201ENST00000526140 972 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC1A1P43005 AC122134.1-201ENST00000565664 1104 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC1A1P43005 MIR4436B2-201ENST00000581415 91 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 MIR4436B1-201ENST00000583272 91 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 MIR432-201ENST00000606207 94 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 MIR6780A-201ENST00000615089 68 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 AC021106.3-201ENST00000623925 531 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
SLC1A1P43005 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC1A1P43005 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC1A1P43005 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC1A1P43005 RLIMP2-201ENST00000427891 1563 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC1A1P43005 AC011266.1-201ENST00000624119 3569 ntBASIC4.57□□□□□ -1.68
SLC1A1P43005 DHX40P1-201ENST00000588725 1412 ntBASIC4.56□□□□□ -1.68
SLC1A1P43005 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC1A1P43005 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SLC1A1P43005 RNU6-697P-201ENST00000363348 107 ntBASIC4.56□□□□□ -1.68
SLC1A1P43005 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC1A1P43005 MIR550A3-201ENST00000390735 95 ntBASIC4.56□□□□□ -1.68
SLC1A1P43005 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC1A1P43005 OR51A6P-201ENST00000418680 1004 ntBASIC4.56□□□□□ -1.68
SLC1A1P43005 RPL7AP25-201ENST00000423357 805 ntBASIC4.56□□□□□ -1.68
SLC1A1P43005 AL360081.1-201ENST00000428299 555 ntBASIC4.56□□□□□ -1.68
SLC1A1P43005 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.56□□□□□ -1.68
SLC1A1P43005 HMGB3P10-201ENST00000434734 572 ntBASIC4.56□□□□□ -1.68
SLC1A1P43005 AC069285.2-201ENST00000440210 275 ntBASIC4.56□□□□□ -1.68
SLC1A1P43005 AL121877.1-201ENST00000453704 622 ntBASIC4.56□□□□□ -1.68
SLC1A1P43005 AC093270.2-201ENST00000486157 792 ntBASIC4.56□□□□□ -1.68
SLC1A1P43005 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC1A1P43005 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SLC1A1P43005 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC1A1P43005 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC1A1P43005 RNA5SP154-201ENST00000516193 111 ntBASIC4.56□□□□□ -1.68
SLC1A1P43005 IFITM8P-201ENST00000522529 394 ntBASIC4.56□□□□□ -1.68
SLC1A1P43005 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC1A1P43005 AC084783.1-201ENST00000565846 910 ntBASIC4.56□□□□□ -1.68
SLC1A1P43005 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC1A1P43005 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC1A1P43005 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC1A1P43005 AC008782.1-201ENST00000603386 430 ntBASIC4.56□□□□□ -1.68
SLC1A1P43005 AC013244.1-201ENST00000604279 193 ntBASIC4.56□□□□□ -1.68
SLC1A1P43005 AC115286.1-201ENST00000604298 434 ntBASIC4.56□□□□□ -1.68
SLC1A1P43005 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.56□□□□□ -1.68
SLC1A1P43005 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SLC1A1P43005 AL021997.2-201ENST00000615674 271 ntBASIC4.56□□□□□ -1.68
SLC1A1P43005 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SLC1A1P43005 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SLC1A1P43005 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.55□□□□□ -1.68
SLC1A1P43005 OR56B2P-202ENST00000641377 2453 ntBASIC4.55□□□□□ -1.68
SLC1A1P43005 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SLC1A1P43005 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC1A1P43005 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC1A1P43005 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
SLC1A1P43005 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SLC1A1P43005 RNU1-130P-201ENST00000363930 160 ntBASIC4.55□□□□□ -1.68
SLC1A1P43005 RNA5SP175-201ENST00000364275 119 ntBASIC4.55□□□□□ -1.68
SLC1A1P43005 GCNT6-201ENST00000379591 934 ntBASIC4.55□□□□□ -1.68
SLC1A1P43005 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.55□□□□□ -1.68
SLC1A1P43005 RNU2-50P-201ENST00000410494 143 ntBASIC4.55□□□□□ -1.68
SLC1A1P43005 SNRPFP1-201ENST00000414761 252 ntBASIC4.55□□□□□ -1.68
SLC1A1P43005 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.55□□□□□ -1.68
SLC1A1P43005 AL161631.1-201ENST00000417933 486 ntBASIC4.55□□□□□ -1.68
SLC1A1P43005 AL121578.1-201ENST00000428051 892 ntBASIC4.55□□□□□ -1.68
SLC1A1P43005 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.55□□□□□ -1.68
SLC1A1P43005 NPM1P39-201ENST00000449818 867 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms