Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.48□□□□□ -1.69
HTTP42858 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.48□□□□□ -1.69
HTTP42858 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.48□□□□□ -1.69
HTTP42858 AF001550.2-201ENST00000636643 217 ntBASIC4.48□□□□□ -1.69
HTTP42858 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.48□□□□□ -1.69
HTTP42858 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.48□□□□□ -1.69
HTTP42858 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HTTP42858 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HTTP42858 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HTTP42858 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HTTP42858 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HTTP42858 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.48□□□□□ -1.69
HTTP42858 MTCO1P45-201ENST00000431457 267 ntBASIC4.48□□□□□ -1.69
HTTP42858 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.48□□□□□ -1.69
HTTP42858 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HTTP42858 CDH12P2-201ENST00000504393 298 ntBASIC4.48□□□□□ -1.69
HTTP42858 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.48□□□□□ -1.69
HTTP42858 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.48□□□□□ -1.69
HTTP42858 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC4.48□□□□□ -1.69
HTTP42858 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HTTP42858 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.47□□□□□ -1.69
HTTP42858 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HTTP42858 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC4.47□□□□□ -1.69
HTTP42858 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.47□□□□□ -1.69
HTTP42858 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.47□□□□□ -1.69
HTTP42858 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.47□□□□□ -1.69
HTTP42858 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.47□□□□□ -1.69
HTTP42858 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.47□□□□□ -1.69
HTTP42858 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.47□□□□□ -1.69
HTTP42858 AC020914.6-201ENST00000594327 272 ntBASIC4.47□□□□□ -1.69
HTTP42858 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.47□□□□□ -1.69
HTTP42858 AC135507.2-201ENST00000612443 309 ntBASIC4.47□□□□□ -1.69
HTTP42858 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.47□□□□□ -1.69
HTTP42858 AL161912.2-201ENST00000565707 3007 ntBASIC4.47□□□□□ -1.69
HTTP42858 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HTTP42858 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HTTP42858 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HTTP42858 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
HTTP42858 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HTTP42858 VPS35P1-201ENST00000563400 1518 ntBASIC4.47□□□□□ -1.69
HTTP42858 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HTTP42858 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HTTP42858 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HTTP42858 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.47□□□□□ -1.69
HTTP42858 HMGB3P19-201ENST00000403971 560 ntBASIC4.47□□□□□ -1.69
HTTP42858 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.47□□□□□ -1.69
HTTP42858 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.47□□□□□ -1.69
HTTP42858 AC037198.2-201ENST00000478845 733 ntBASIC4.47□□□□□ -1.69
HTTP42858 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.47□□□□□ -1.69
HTTP42858 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC4.47□□□□□ -1.69
HTTP42858 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
HTTP42858 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.47□□□□□ -1.69
HTTP42858 CDY11P-201ENST00000447168 1651 ntBASIC4.47□□□□□ -1.69
HTTP42858 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HTTP42858 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.46□□□□□ -1.69
HTTP42858 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
HTTP42858 AC083863.1-201ENST00000438811 231 ntBASIC4.46□□□□□ -1.69
HTTP42858 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.46□□□□□ -1.69
HTTP42858 AC112206.1-201ENST00000468416 477 ntBASIC4.46□□□□□ -1.69
HTTP42858 RNA5SP179-201ENST00000517284 121 ntBASIC4.46□□□□□ -1.69
HTTP42858 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.46□□□□□ -1.69
HTTP42858 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.46□□□□□ -1.69
HTTP42858 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.46□□□□□ -1.69
HTTP42858 HMGB2P1-201ENST00000591146 634 ntBASIC4.46□□□□□ -1.69
HTTP42858 QTRT1P1-201ENST00000604344 1078 ntBASIC4.46□□□□□ -1.69
HTTP42858 AC006077.1-201ENST00000604746 343 ntBASIC4.46□□□□□ -1.69
HTTP42858 MIR7112-201ENST00000616126 65 ntBASIC4.46□□□□□ -1.69
HTTP42858 AC243312.2-201ENST00000623340 601 ntBASIC4.46□□□□□ -1.69
HTTP42858 SCARNA15-201ENST00000607520 4325 ntBASIC4.46□□□□□ -1.7
HTTP42858 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HTTP42858 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HTTP42858 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.46□□□□□ -1.7
HTTP42858 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.46□□□□□ -1.7
HTTP42858 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.46□□□□□ -1.7
HTTP42858 RN7SL601P-201ENST00000471221 293 ntBASIC4.46□□□□□ -1.7
HTTP42858 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC4.46□□□□□ -1.7
HTTP42858 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.46□□□□□ -1.7
HTTP42858 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.46□□□□□ -1.7
HTTP42858 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC4.46□□□□□ -1.7
HTTP42858 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HTTP42858 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HTTP42858 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.46□□□□□ -1.7
HTTP42858 EI24P3-201ENST00000399046 1062 ntBASIC4.46□□□□□ -1.7
HTTP42858 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.46□□□□□ -1.7
HTTP42858 RPL21P8-201ENST00000465083 535 ntBASIC4.46□□□□□ -1.7
HTTP42858 AC004069.2-201ENST00000505438 1114 ntBASIC4.46□□□□□ -1.7
HTTP42858 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.46□□□□□ -1.7
HTTP42858 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.46□□□□□ -1.7
HTTP42858 MIR8058-201ENST00000615737 89 ntBASIC4.46□□□□□ -1.7
HTTP42858 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HTTP42858 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HTTP42858 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
HTTP42858 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HTTP42858 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC4.45□□□□□ -1.7
HTTP42858 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HTTP42858 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HTTP42858 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HTTP42858 SNORA48.5-201ENST00000391143 135 ntBASIC4.45□□□□□ -1.7
HTTP42858 AL035423.1-201ENST00000420331 213 ntBASIC4.45□□□□□ -1.7
HTTP42858 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms