Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AL034370.1-201ENST00000397254 1590 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD12P35452 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD12P35452 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXD12P35452 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
HOXD12P35452 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD12P35452 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD12P35452 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HOXD12P35452 MTND4P31-201ENST00000425607 1343 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 ZNF652P1-201ENST00000442420 1309 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD12P35452 RNU5B-1-201ENST00000363286 116 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 RNA5SP223-201ENST00000365174 120 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 RNA5SP87-201ENST00000384155 118 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXD12P35452 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXD12P35452 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD12P35452 RAB28P1-201ENST00000411517 641 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 EIF4A1P1-201ENST00000420241 934 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXD12P35452 DDX39BP1-205ENST00000422507 192 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 AC092648.1-201ENST00000425870 423 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD12P35452 AC104837.2-201ENST00000427236 424 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXD12P35452 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXD12P35452 AL450263.2-201ENST00000439400 589 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 MTND6P18-201ENST00000439477 513 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 AC000041.1-201ENST00000439655 175 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 OR10R1P-201ENST00000441524 1141 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXD12P35452 AC097499.1-201ENST00000444277 208 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 AC239809.1-201ENST00000450470 217 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 Z95152.1-201ENST00000453556 656 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 AC006463.2-201ENST00000473326 348 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXD12P35452 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.33□□□□□ -1.56
HOXD12P35452 GTF2F2P1-201ENST00000511083 675 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXD12P35452 AC004980.4-201ENST00000513375 203 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD12P35452 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD12P35452 AC063949.1-201ENST00000552900 865 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 AL049830.4-201ENST00000555149 351 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXD12P35452 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXD12P35452 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD12P35452 AC027455.1-201ENST00000574104 594 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXD12P35452 AC011487.3-201ENST00000593607 453 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 AL133481.2-203ENST00000607558 139 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 AC097478.2-201ENST00000610572 514 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
HOXD12P35452 EIF3FP1-201ENST00000613970 806 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 AC091905.4-201ENST00000623432 202 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 AC019226.2-201ENST00000625973 424 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXD12P35452 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXD12P35452 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD12P35452 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXD12P35452 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXD12P35452 AC026523.2-201ENST00000625039 7739 ntBASIC5.33□□□□□ -1.56
HOXD12P35452 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD12P35452 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD12P35452 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXD12P35452 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXD12P35452 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXD12P35452 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD12P35452 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD12P35452 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD12P35452 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD12P35452 AC009962.1-201ENST00000567327 3813 ntBASIC5.32□□□□□ -1.56
HOXD12P35452 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXD12P35452 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD12P35452 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.32□□□□□ -1.56
HOXD12P35452 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
HOXD12P35452 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXD12P35452 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXD12P35452 AL132640.2-201ENST00000559968 1698 ntBASIC5.32□□□□□ -1.56
HOXD12P35452 DDX18P3-201ENST00000404856 2007 ntBASIC5.32□□□□□ -1.56
HOXD12P35452 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD12P35452 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXD12P35452 AC011155.1-201ENST00000316512 456 ntBASIC5.32□□□□□ -1.56
HOXD12P35452 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXD12P35452 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXD12P35452 RNU1-136P-201ENST00000384181 164 ntBASIC5.32□□□□□ -1.56
HOXD12P35452 RNU6-906P-201ENST00000384700 70 ntBASIC5.32□□□□□ -1.56
HOXD12P35452 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HOXD12P35452 NUDT19P3-201ENST00000404698 555 ntBASIC5.32□□□□□ -1.56
HOXD12P35452 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXD12P35452 AC073069.1-201ENST00000428657 441 ntBASIC5.32□□□□□ -1.56
HOXD12P35452 Z77249.1-201ENST00000444622 1175 ntBASIC5.32□□□□□ -1.56
HOXD12P35452 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXD12P35452 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXD12P35452 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXD12P35452 APOOP2-201ENST00000461561 539 ntBASIC5.32□□□□□ -1.56
HOXD12P35452 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXD12P35452 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXD12P35452 RPS4XP6-201ENST00000477670 797 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms