Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RLIMP1-201ENST00000339626 1680 ntBASIC5.53□□□□□ -1.52
RFC4P35249 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RFC4P35249 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RFC4P35249 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
RFC4P35249 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
RFC4P35249 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.53□□□□□ -1.52
RFC4P35249 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RFC4P35249 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RFC4P35249 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RFC4P35249 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RFC4P35249 RNU6-729P-201ENST00000384399 107 ntBASIC5.53□□□□□ -1.52
RFC4P35249 AL583835.1-201ENST00000399570 407 ntBASIC5.53□□□□□ -1.52
RFC4P35249 RPL21P65-201ENST00000406094 466 ntBASIC5.53□□□□□ -1.52
RFC4P35249 SNORA11.1-201ENST00000408133 129 ntBASIC5.53□□□□□ -1.52
RFC4P35249 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.53□□□□□ -1.52
RFC4P35249 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.53□□□□□ -1.52
RFC4P35249 AC108032.1-201ENST00000416706 207 ntBASIC5.53□□□□□ -1.52
RFC4P35249 RPL21P43-201ENST00000425440 472 ntBASIC5.53□□□□□ -1.52
RFC4P35249 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RFC4P35249 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.53□□□□□ -1.52
RFC4P35249 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
RFC4P35249 AC111000.5-201ENST00000506559 1178 ntBASIC5.53□□□□□ -1.52
RFC4P35249 ATP1B1P1-201ENST00000509767 915 ntBASIC5.53□□□□□ -1.52
RFC4P35249 RNA5SP519-201ENST00000516480 119 ntBASIC5.53□□□□□ -1.52
RFC4P35249 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.53□□□□□ -1.52
RFC4P35249 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.53□□□□□ -1.52
RFC4P35249 MTND2P17-201ENST00000550281 688 ntBASIC5.53□□□□□ -1.52
RFC4P35249 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RFC4P35249 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.53□□□□□ -1.52
RFC4P35249 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RFC4P35249 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.53□□□□□ -1.52
RFC4P35249 AC007546.1-201ENST00000619452 559 ntBASIC5.53□□□□□ -1.52
RFC4P35249 CASC19-206ENST00000641028 1430 ntBASIC5.53□□□□□ -1.52
RFC4P35249 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RFC4P35249 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RFC4P35249 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RFC4P35249 AL606537.1-201ENST00000607258 2011 ntBASIC5.52□□□□□ -1.53
RFC4P35249 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.52□□□□□ -1.53
RFC4P35249 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RFC4P35249 RNU1-14P-201ENST00000362759 152 ntBASIC5.52□□□□□ -1.53
RFC4P35249 AL589994.1-201ENST00000404962 340 ntBASIC5.52□□□□□ -1.53
RFC4P35249 FCF1P5-201ENST00000406490 482 ntBASIC5.52□□□□□ -1.53
RFC4P35249 RNA5SP36-201ENST00000410197 133 ntBASIC5.52□□□□□ -1.53
RFC4P35249 RN7SKP235-201ENST00000410662 305 ntBASIC5.52□□□□□ -1.53
RFC4P35249 AC104333.2-201ENST00000422630 192 ntBASIC5.52□□□□□ -1.53
RFC4P35249 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.52□□□□□ -1.53
RFC4P35249 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RFC4P35249 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RFC4P35249 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.52□□□□□ -1.53
RFC4P35249 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.52□□□□□ -1.53
RFC4P35249 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.52□□□□□ -1.53
RFC4P35249 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.52□□□□□ -1.53
RFC4P35249 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.52□□□□□ -1.53
RFC4P35249 OR5BC1P-201ENST00000529327 739 ntBASIC5.52□□□□□ -1.53
RFC4P35249 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.52□□□□□ -1.53
RFC4P35249 RN7SL703P-201ENST00000578485 302 ntBASIC5.52□□□□□ -1.53
RFC4P35249 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.52□□□□□ -1.53
RFC4P35249 RPL7P50-201ENST00000600588 727 ntBASIC5.52□□□□□ -1.53
RFC4P35249 AC023762.1-201ENST00000603280 584 ntBASIC5.52□□□□□ -1.53
RFC4P35249 AC099669.2-201ENST00000616549 437 ntBASIC5.52□□□□□ -1.53
RFC4P35249 AC004777.1-201ENST00000624317 287 ntBASIC5.52□□□□□ -1.53
RFC4P35249 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.52□□□□□ -1.53
RFC4P35249 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.52□□□□□ -1.53
RFC4P35249 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RFC4P35249 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RFC4P35249 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
RFC4P35249 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.52□□□□□ -1.53
RFC4P35249 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
RFC4P35249 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RFC4P35249 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RFC4P35249 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RFC4P35249 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.51□□□□□ -1.53
RFC4P35249 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
RFC4P35249 MIR208A-201ENST00000362287 71 ntBASIC5.51□□□□□ -1.53
RFC4P35249 AL672167.2-201ENST00000377164 879 ntBASIC5.51□□□□□ -1.53
RFC4P35249 RNU6ATAC-201ENST00000408749 126 ntBASIC5.51□□□□□ -1.53
RFC4P35249 RPS20P14-201ENST00000412545 360 ntBASIC5.51□□□□□ -1.53
RFC4P35249 CKS1BP6-201ENST00000424932 240 ntBASIC5.51□□□□□ -1.53
RFC4P35249 AC106901.1-201ENST00000425086 698 ntBASIC5.51□□□□□ -1.53
RFC4P35249 AL157831.1-201ENST00000426134 473 ntBASIC5.51□□□□□ -1.53
RFC4P35249 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.51□□□□□ -1.53
RFC4P35249 UBE2V1P3-201ENST00000439651 417 ntBASIC5.51□□□□□ -1.53
RFC4P35249 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.51□□□□□ -1.53
RFC4P35249 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.51□□□□□ -1.53
RFC4P35249 AC010374.1-201ENST00000503762 1237 ntBASIC5.51□□□□□ -1.53
RFC4P35249 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.51□□□□□ -1.53
RFC4P35249 AC010460.1-201ENST00000507087 466 ntBASIC5.51□□□□□ -1.53
RFC4P35249 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.51□□□□□ -1.53
RFC4P35249 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.51□□□□□ -1.53
RFC4P35249 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RFC4P35249 AC099522.1-202ENST00000514718 367 ntBASIC5.51□□□□□ -1.53
RFC4P35249 FTH1P11-201ENST00000517577 551 ntBASIC5.51□□□□□ -1.53
RFC4P35249 DUX4L52-201ENST00000549363 777 ntBASIC5.51□□□□□ -1.53
RFC4P35249 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.51□□□□□ -1.53
RFC4P35249 AL359219.2-201ENST00000555184 348 ntBASIC5.51□□□□□ -1.53
RFC4P35249 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.51□□□□□ -1.53
RFC4P35249 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.51□□□□□ -1.53
RFC4P35249 AP005901.4-201ENST00000577336 569 ntBASIC5.51□□□□□ -1.53
RFC4P35249 AL354984.3-201ENST00000604803 325 ntBASIC5.51□□□□□ -1.53
RFC4P35249 FAM27D1-201ENST00000612308 341 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms