Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC13P31276 RNA5SP392-201ENST00000516905 112 ntBASIC5.12□□□□□ -1.59
HOXC13P31276 AP001880.2-201ENST00000538233 448 ntBASIC5.12□□□□□ -1.59
HOXC13P31276 DYNLL1P4-201ENST00000549314 266 ntBASIC5.12□□□□□ -1.59
HOXC13P31276 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXC13P31276 NF1P5-201ENST00000588287 448 ntBASIC5.12□□□□□ -1.59
HOXC13P31276 OR6R2P-201ENST00000609216 300 ntBASIC5.12□□□□□ -1.59
HOXC13P31276 AC110792.4-201ENST00000609843 298 ntBASIC5.12□□□□□ -1.59
HOXC13P31276 LINC00901.1-201ENST00000617252 152 ntBASIC5.12□□□□□ -1.59
HOXC13P31276 AC068831.8-201ENST00000620171 435 ntBASIC5.12□□□□□ -1.59
HOXC13P31276 AL391262.2-201ENST00000622466 494 ntBASIC5.12□□□□□ -1.59
HOXC13P31276 AL356490.1-201ENST00000623079 479 ntBASIC5.12□□□□□ -1.59
HOXC13P31276 HPVC1-201ENST00000629899 1198 ntBASIC5.12□□□□□ -1.59
HOXC13P31276 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXC13P31276 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC13P31276 AL133268.1-201ENST00000405676 1401 ntBASIC5.12□□□□□ -1.59
HOXC13P31276 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HOXC13P31276 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.12□□□□□ -1.59
HOXC13P31276 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC13P31276 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HOXC13P31276 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC13P31276 AC068446.1-201ENST00000556425 1549 ntBASIC5.12□□□□□ -1.59
HOXC13P31276 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXC13P31276 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC13P31276 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC13P31276 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC13P31276 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC13P31276 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC13P31276 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
HOXC13P31276 OR14L1P-202ENST00000641545 3009 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC13P31276 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC13P31276 SNORD51.1-201ENST00000365405 77 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC13P31276 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC13P31276 AC009480.2-201ENST00000422916 432 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 IPMKP1-201ENST00000425988 855 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 FAR1P1-201ENST00000427163 934 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 ZNF965P-201ENST00000432501 817 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 AL691517.1-201ENST00000440833 1235 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 BTF3P6-201ENST00000448054 499 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC13P31276 AL500527.1-201ENST00000448532 255 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 AC068587.1-201ENST00000483613 781 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 AC116562.1-201ENST00000485355 781 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 AC023050.1-201ENST00000498198 304 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC13P31276 RNA5SP360-201ENST00000516555 118 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXC13P31276 AC026688.1-201ENST00000520639 1168 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC13P31276 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC13P31276 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXC13P31276 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC13P31276 NOP56P3-201ENST00000549457 385 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC13P31276 AL359219.2-201ENST00000555184 348 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 TVP23CP2-201ENST00000571473 623 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC13P31276 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC13P31276 AC115621.1-201ENST00000604653 858 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 AC015849.2-201ENST00000605738 409 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 MIR6715B-201ENST00000637172 77 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC13P31276 AL450345.1-202ENST00000605741 3881 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC13P31276 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
HOXC13P31276 AL031119.1-201ENST00000404707 1879 ntBASIC5.11□□□□□ -1.59
HOXC13P31276 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC13P31276 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
HOXC13P31276 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC13P31276 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HOXC13P31276 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC13P31276 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC13P31276 ATP5F1P2-201ENST00000398143 760 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
HOXC13P31276 AL590290.1-201ENST00000405336 380 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC13P31276 AC007529.1-201ENST00000418574 2178 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 SAGE2P-201ENST00000420011 2126 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 CHIAP3-201ENST00000423668 1133 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXC13P31276 RSL24D1P6-201ENST00000426934 401 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXC13P31276 MTCO3P43-201ENST00000440974 771 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXC13P31276 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC13P31276 XKRY2-201ENST00000442362 1093 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 TCEA1P3-201ENST00000443005 880 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 AC000111.2-201ENST00000448200 210 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 MTND2P25-201ENST00000449028 610 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 CEACAMP6-201ENST00000452007 574 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC13P31276 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 AL356981.1-201ENST00000454879 684 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC13P31276 snoU13.1-201ENST00000459157 104 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC13P31276 IGBP1P5-201ENST00000507524 1000 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms