Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RFX1P22670 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RFX1P22670 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.17□□□□□ -1.26
RFX1P22670 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
RFX1P22670 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RFX1P22670 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
RFX1P22670 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.16□□□□□ -1.26
RFX1P22670 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
RFX1P22670 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RFX1P22670 RNA5SP350-201ENST00000363298 111 ntBASIC7.16□□□□□ -1.26
RFX1P22670 RNA5SP433-201ENST00000364491 114 ntBASIC7.16□□□□□ -1.26
RFX1P22670 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.16□□□□□ -1.26
RFX1P22670 NFIB-202ENST00000380924 840 ntTSL 5 BASIC7.16□□□□□ -1.26
RFX1P22670 RNU6-809P-201ENST00000384461 107 ntBASIC7.16□□□□□ -1.26
RFX1P22670 Y_RNA.573-201ENST00000384763 105 ntBASIC7.16□□□□□ -1.26
RFX1P22670 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RFX1P22670 PSMA6P1-201ENST00000400275 741 ntBASIC7.16□□□□□ -1.26
RFX1P22670 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RFX1P22670 MAST4-207ENST00000407621 559 ntTSL 2 BASIC7.16□□□□□ -1.26
RFX1P22670 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.16□□□□□ -1.26
RFX1P22670 RNU2-41P-201ENST00000410991 178 ntBASIC7.16□□□□□ -1.26
RFX1P22670 RN7SKP263-201ENST00000411194 309 ntBASIC7.16□□□□□ -1.26
RFX1P22670 AC009237.5-201ENST00000414271 501 ntBASIC7.16□□□□□ -1.26
RFX1P22670 RPL36P18-201ENST00000419316 318 ntBASIC7.16□□□□□ -1.26
RFX1P22670 AC069157.1-201ENST00000421749 137 ntBASIC7.16□□□□□ -1.26
RFX1P22670 AL157884.1-201ENST00000424561 454 ntBASIC7.16□□□□□ -1.26
RFX1P22670 NPM1P34-201ENST00000428821 893 ntBASIC7.16□□□□□ -1.26
RFX1P22670 MTND4LP16-201ENST00000440828 295 ntBASIC7.16□□□□□ -1.26
RFX1P22670 RPS4XP4-201ENST00000443195 763 ntBASIC7.16□□□□□ -1.26
RFX1P22670 VDAC2P4-201ENST00000452925 711 ntBASIC7.16□□□□□ -1.26
RFX1P22670 HIGD1AP8-201ENST00000453927 274 ntBASIC7.16□□□□□ -1.26
RFX1P22670 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.16□□□□□ -1.26
RFX1P22670 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC7.16□□□□□ -1.26
RFX1P22670 RPL15P21-201ENST00000495592 567 ntBASIC7.16□□□□□ -1.26
RFX1P22670 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC7.16□□□□□ -1.26
RFX1P22670 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC7.16□□□□□ -1.26
RFX1P22670 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
RFX1P22670 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
RFX1P22670 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.16□□□□□ -1.26
RFX1P22670 AC009646.1-201ENST00000510455 318 ntBASIC7.16□□□□□ -1.26
RFX1P22670 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.16□□□□□ -1.26
RFX1P22670 RN7SKP196-201ENST00000516267 345 ntBASIC7.16□□□□□ -1.26
RFX1P22670 SNORA20.3-201ENST00000516880 132 ntBASIC7.16□□□□□ -1.26
RFX1P22670 RNU6-1003P-201ENST00000517099 105 ntBASIC7.16□□□□□ -1.26
RFX1P22670 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.16□□□□□ -1.26
RFX1P22670 HSPA8P13-201ENST00000523715 472 ntBASIC7.16□□□□□ -1.26
RFX1P22670 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC7.16□□□□□ -1.26
RFX1P22670 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.16□□□□□ -1.26
RFX1P22670 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.16□□□□□ -1.26
RFX1P22670 HMGN2P47-201ENST00000559378 272 ntBASIC7.16□□□□□ -1.26
RFX1P22670 AC068714.1-201ENST00000559623 800 ntBASIC7.16□□□□□ -1.26
RFX1P22670 HMGB1P33-201ENST00000563485 527 ntBASIC7.16□□□□□ -1.26
RFX1P22670 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.16□□□□□ -1.26
RFX1P22670 ANP32BP1-202ENST00000568553 737 ntBASIC7.16□□□□□ -1.26
RFX1P22670 MIR4433B-201ENST00000581329 102 ntBASIC7.16□□□□□ -1.26
RFX1P22670 AC007448.1-201ENST00000582714 234 ntBASIC7.16□□□□□ -1.26
RFX1P22670 FGF7P1-201ENST00000582820 288 ntBASIC7.16□□□□□ -1.26
RFX1P22670 SNORD39.3-201ENST00000584451 71 ntBASIC7.16□□□□□ -1.26
RFX1P22670 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.16□□□□□ -1.26
RFX1P22670 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC7.16□□□□□ -1.26
RFX1P22670 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.16□□□□□ -1.26
RFX1P22670 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC7.16□□□□□ -1.26
RFX1P22670 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.16□□□□□ -1.26
RFX1P22670 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC7.16□□□□□ -1.26
RFX1P22670 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.16□□□□□ -1.26
RFX1P22670 AC006328.2-201ENST00000623198 397 ntBASIC7.16□□□□□ -1.26
RFX1P22670 AC012005.2-201ENST00000624333 397 ntBASIC7.16□□□□□ -1.26
RFX1P22670 AP005264.7-201ENST00000625003 745 ntBASIC7.16□□□□□ -1.26
RFX1P22670 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC7.16□□□□□ -1.26
RFX1P22670 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.16□□□□□ -1.26
RFX1P22670 WBP11P1-201ENST00000562560 1931 ntBASIC7.16□□□□□ -1.26
RFX1P22670 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
RFX1P22670 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.16□□□□□ -1.26
RFX1P22670 AC010329.2-201ENST00000595195 2737 ntBASIC7.16□□□□□ -1.26
RFX1P22670 AC068733.2-201ENST00000605434 1418 ntBASIC7.16□□□□□ -1.26
RFX1P22670 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
RFX1P22670 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
RFX1P22670 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RFX1P22670 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RFX1P22670 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
RFX1P22670 ANKRD62P1-201ENST00000434304 1623 ntBASIC7.16□□□□□ -1.26
RFX1P22670 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.16□□□□□ -1.26
RFX1P22670 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.15□□□□□ -1.26
RFX1P22670 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
RFX1P22670 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC7.15□□□□□ -1.26
RFX1P22670 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.15□□□□□ -1.26
RFX1P22670 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7.15□□□□□ -1.26
RFX1P22670 LINC02019-201ENST00000608605 2060 ntBASIC7.15□□□□□ -1.26
RFX1P22670 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RFX1P22670 AC005225.5-201ENST00000623547 2225 ntBASIC7.15□□□□□ -1.26
RFX1P22670 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RFX1P22670 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
RFX1P22670 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RFX1P22670 SNORA38B-201ENST00000363524 131 ntBASIC7.15□□□□□ -1.26
RFX1P22670 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC7.15□□□□□ -1.26
RFX1P22670 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RFX1P22670 RNU6-1103P-201ENST00000384150 107 ntBASIC7.15□□□□□ -1.26
RFX1P22670 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC7.15□□□□□ -1.26
RFX1P22670 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RFX1P22670 RN7SKP240-201ENST00000410583 375 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms