Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 MAPK10-320ENST00000641462 6696 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AC139713.2-215ENST00000641428 5037 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 MTND3P20-201ENST00000407663 186 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 MTND4LP7-201ENST00000431728 294 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 ZNF965P-201ENST00000432501 817 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 OR1H1P-201ENST00000448731 937 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 MTND5P8-201ENST00000449817 1083 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AC010733.1-201ENST00000451515 401 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 SBDSP1-204ENST00000453858 737 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 CYCSP34-201ENST00000458172 304 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AC025181.1-201ENST00000477507 416 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AC073358.1-201ENST00000505671 684 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 RN7SKP141-201ENST00000516167 338 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 FKBP1BP1-201ENST00000553366 325 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AC115085.1-201ENST00000588924 229 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AC239803.2-201ENST00000610161 430 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AC104307.1-201ENST00000616142 196 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AL445487.1-201ENST00000415694 1580 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 AL592437.2-201ENST00000421655 2434 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AC073429.2-201ENST00000569694 1444 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AL590762.2-201ENST00000395798 571 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 ARL4AP5-201ENST00000404372 599 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AL590290.1-201ENST00000405336 380 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AL139128.1-201ENST00000413921 941 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 FO393419.3-201ENST00000428741 282 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AC104651.2-201ENST00000447549 528 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AL513343.1-201ENST00000451818 792 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 RPS6P2-201ENST00000454208 705 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 SYT14P1-201ENST00000481459 721 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AC023050.1-201ENST00000498198 304 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 SCARNA22-201ENST00000503991 125 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AC138938.1-201ENST00000515431 782 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AC011477.5-201ENST00000586571 259 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 NF1P5-201ENST00000588287 448 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 BNIP3P32-201ENST00000600015 554 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AP003117.1-201ENST00000602771 554 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 FAM25E-202ENST00000608562 189 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 AC053481.2-202ENST00000582394 1500 ntBASIC4.8□□□□□ -1.64
HLA-DPA1P20036 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DPA1P20036 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms