Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
THBS1P07996 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.49□□□□□ -1.37
THBS1P07996 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
THBS1P07996 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.49□□□□□ -1.37
THBS1P07996 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
THBS1P07996 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
THBS1P07996 RNU5E-1-201ENST00000362477 120 ntBASIC6.49□□□□□ -1.37
THBS1P07996 SNORA62.2-201ENST00000364672 152 ntBASIC6.49□□□□□ -1.37
THBS1P07996 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
THBS1P07996 RNU6-730P-201ENST00000383954 104 ntBASIC6.49□□□□□ -1.37
THBS1P07996 RNU6-831P-201ENST00000384548 107 ntBASIC6.49□□□□□ -1.37
THBS1P07996 Y_RNA.556-201ENST00000384677 113 ntBASIC6.49□□□□□ -1.37
THBS1P07996 RNU6-308P-201ENST00000390957 107 ntBASIC6.49□□□□□ -1.37
THBS1P07996 RN7SKP271-201ENST00000410528 320 ntBASIC6.49□□□□□ -1.37
THBS1P07996 RN7SKP137-201ENST00000411074 307 ntBASIC6.49□□□□□ -1.37
THBS1P07996 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
THBS1P07996 AL807761.1-201ENST00000417622 171 ntBASIC6.49□□□□□ -1.37
THBS1P07996 RBMY2KP-201ENST00000418221 992 ntBASIC6.49□□□□□ -1.37
THBS1P07996 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.49□□□□□ -1.37
THBS1P07996 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.49□□□□□ -1.37
THBS1P07996 RSU1P2-202ENST00000437884 485 ntBASIC6.49□□□□□ -1.37
THBS1P07996 AL592114.2-201ENST00000440142 532 ntBASIC6.49□□□□□ -1.37
THBS1P07996 AC079781.2-201ENST00000446424 169 ntBASIC6.49□□□□□ -1.37
THBS1P07996 AL645937.3-201ENST00000453647 936 ntBASIC6.49□□□□□ -1.37
THBS1P07996 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.49□□□□□ -1.37
THBS1P07996 AL163973.1-201ENST00000484753 577 ntBASIC6.49□□□□□ -1.37
THBS1P07996 AL035404.1-201ENST00000497982 568 ntBASIC6.49□□□□□ -1.37
THBS1P07996 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.49□□□□□ -1.37
THBS1P07996 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
THBS1P07996 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.49□□□□□ -1.37
THBS1P07996 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.49□□□□□ -1.37
THBS1P07996 SCARNA6-201ENST00000515982 265 ntBASIC6.49□□□□□ -1.37
THBS1P07996 MRPS16P1-201ENST00000523462 412 ntBASIC6.49□□□□□ -1.37
THBS1P07996 COPS8P3-201ENST00000526024 482 ntBASIC6.49□□□□□ -1.37
THBS1P07996 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC6.49□□□□□ -1.37
THBS1P07996 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.49□□□□□ -1.37
THBS1P07996 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.49□□□□□ -1.37
THBS1P07996 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.49□□□□□ -1.37
THBS1P07996 ACTG1P15-201ENST00000570019 1063 ntBASIC6.49□□□□□ -1.37
THBS1P07996 AL078601.3-201ENST00000573303 535 ntBASIC6.49□□□□□ -1.37
THBS1P07996 SNORA70D-201ENST00000578836 135 ntBASIC6.49□□□□□ -1.37
THBS1P07996 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
THBS1P07996 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.49□□□□□ -1.37
THBS1P07996 AC061975.3-201ENST00000583209 244 ntBASIC6.49□□□□□ -1.37
THBS1P07996 AC087575.1-201ENST00000585087 229 ntBASIC6.49□□□□□ -1.37
THBS1P07996 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.49□□□□□ -1.37
THBS1P07996 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.49□□□□□ -1.37
THBS1P07996 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC6.49□□□□□ -1.37
THBS1P07996 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC6.49□□□□□ -1.37
THBS1P07996 AC121334.2-201ENST00000605387 271 ntBASIC6.49□□□□□ -1.37
THBS1P07996 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
THBS1P07996 AC005014.2-201ENST00000607795 599 ntBASIC6.49□□□□□ -1.37
THBS1P07996 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.49□□□□□ -1.37
THBS1P07996 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
THBS1P07996 AC103564.3-201ENST00000621194 220 ntBASIC6.49□□□□□ -1.37
THBS1P07996 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
THBS1P07996 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.49□□□□□ -1.37
THBS1P07996 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
THBS1P07996 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.49□□□□□ -1.37
THBS1P07996 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.49□□□□□ -1.37
THBS1P07996 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
THBS1P07996 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
THBS1P07996 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.49□□□□□ -1.37
THBS1P07996 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
THBS1P07996 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
THBS1P07996 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.49□□□□□ -1.37
THBS1P07996 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.49□□□□□ -1.37
THBS1P07996 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.49□□□□□ -1.37
THBS1P07996 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
THBS1P07996 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
THBS1P07996 SPATA31C1-201ENST00000420021 3895 ntBASIC6.49□□□□□ -1.37
THBS1P07996 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.49□□□□□ -1.37
THBS1P07996 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
THBS1P07996 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
THBS1P07996 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
THBS1P07996 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
THBS1P07996 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
THBS1P07996 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
THBS1P07996 AC013488.1-201ENST00000526618 1838 ntBASIC6.48□□□□□ -1.37
THBS1P07996 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
THBS1P07996 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.48□□□□□ -1.37
THBS1P07996 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
THBS1P07996 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.48□□□□□ -1.37
THBS1P07996 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
THBS1P07996 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
THBS1P07996 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
THBS1P07996 OR1S2-201ENST00000302592 978 ntBASIC6.48□□□□□ -1.37
THBS1P07996 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
THBS1P07996 Y_RNA.46-201ENST00000362695 102 ntBASIC6.48□□□□□ -1.37
THBS1P07996 RNU1-24P-201ENST00000364285 165 ntBASIC6.48□□□□□ -1.37
THBS1P07996 AC092642.1-201ENST00000392417 425 ntBASIC6.48□□□□□ -1.37
THBS1P07996 HMGB1P17-201ENST00000403495 628 ntBASIC6.48□□□□□ -1.37
THBS1P07996 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.48□□□□□ -1.37
THBS1P07996 RN7SKP108-201ENST00000411367 328 ntBASIC6.48□□□□□ -1.37
THBS1P07996 PPIAP23-201ENST00000420099 497 ntBASIC6.48□□□□□ -1.37
THBS1P07996 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
THBS1P07996 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.48□□□□□ -1.37
THBS1P07996 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.48□□□□□ -1.37
THBS1P07996 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
THBS1P07996 AC104651.2-201ENST00000447549 528 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms