Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC091768.1-201ENST00000609258 930 ntBASIC6.4□□□□□ -1.38
PDGFAP04085 AC004241.2-201ENST00000614562 444 ntBASIC6.4□□□□□ -1.38
PDGFAP04085 AC068722.2-201ENST00000618734 544 ntBASIC6.4□□□□□ -1.38
PDGFAP04085 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.4□□□□□ -1.38
PDGFAP04085 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.4□□□□□ -1.38
PDGFAP04085 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.4□□□□□ -1.38
PDGFAP04085 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PDGFAP04085 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
PDGFAP04085 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PDGFAP04085 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PDGFAP04085 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.4□□□□□ -1.39
PDGFAP04085 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFAP04085 AC012213.2-201ENST00000562917 4597 ntBASIC6.4□□□□□ -1.39
PDGFAP04085 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFAP04085 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFAP04085 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFAP04085 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFAP04085 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.4□□□□□ -1.39
PDGFAP04085 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.4□□□□□ -1.39
PDGFAP04085 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PDGFAP04085 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
PDGFAP04085 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
PDGFAP04085 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFAP04085 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFAP04085 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFAP04085 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFAP04085 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
PDGFAP04085 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFAP04085 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.39□□□□□ -1.39
PDGFAP04085 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFAP04085 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.39□□□□□ -1.39
PDGFAP04085 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.39□□□□□ -1.39
PDGFAP04085 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PDGFAP04085 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFAP04085 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.39□□□□□ -1.39
PDGFAP04085 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.39□□□□□ -1.39
PDGFAP04085 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFAP04085 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFAP04085 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PDGFAP04085 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.39□□□□□ -1.39
PDGFAP04085 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFAP04085 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.39□□□□□ -1.39
PDGFAP04085 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.39□□□□□ -1.39
PDGFAP04085 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PDGFAP04085 RNU6-845P-201ENST00000362578 103 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 Y_RNA.159-201ENST00000363674 87 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 RNU1-85P-201ENST00000364127 164 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 RNU1-39P-201ENST00000383897 165 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PDGFAP04085 DHFRP6-201ENST00000401776 268 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 RPL7P58-201ENST00000402913 758 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFAP04085 AL078604.1-201ENST00000404609 466 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 RPL12P23-201ENST00000405880 490 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFAP04085 PRELID3BP11-201ENST00000414230 479 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFAP04085 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.39□□□□□ -1.39
PDGFAP04085 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFAP04085 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
PDGFAP04085 RPL37P1-201ENST00000432310 284 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 EIF5AP4-201ENST00000441206 465 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFAP04085 HMGN1P36-201ENST00000446623 298 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFAP04085 RN7SL797P-201ENST00000486314 297 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFAP04085 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.39□□□□□ -1.39
PDGFAP04085 RN7SKP196-201ENST00000516267 345 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 RNU6-714P-201ENST00000516963 103 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFAP04085 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFAP04085 IGLVV-66-201ENST00000523818 341 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 BRD9P1-201ENST00000529855 560 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFAP04085 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.39□□□□□ -1.39
PDGFAP04085 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFAP04085 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFAP04085 AC007424.1-203ENST00000554613 687 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFAP04085 MIR3154-201ENST00000577829 84 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 AC015917.1-201ENST00000579654 510 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.39□□□□□ -1.39
PDGFAP04085 AC005498.1-201ENST00000592125 465 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 CR382285.1-202ENST00000604687 547 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 AC104184.1-201ENST00000607513 721 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 MIR6071-201ENST00000616741 78 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 MIR1910-201ENST00000636955 80 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFAP04085 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFAP04085 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.39□□□□□ -1.39
PDGFAP04085 AL359263.1-201ENST00000441188 2796 ntBASIC6.39□□□□□ -1.39
PDGFAP04085 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFAP04085 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFAP04085 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.38□□□□□ -1.39
PDGFAP04085 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.38□□□□□ -1.39
PDGFAP04085 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms