Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL445363.3-201ENST00000623080 671 ntBASIC4□□□□□ -1.77
SPTA1P02549 AL034408.1-201ENST00000637712 664 ntBASIC4□□□□□ -1.77
SPTA1P02549 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SPTA1P02549 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4□□□□□ -1.77
SPTA1P02549 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SPTA1P02549 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SPTA1P02549 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SPTA1P02549 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.99□□□□□ -1.77
SPTA1P02549 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SPTA1P02549 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.99□□□□□ -1.77
SPTA1P02549 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SPTA1P02549 ATP5F1P4-201ENST00000397288 746 ntBASIC3.99□□□□□ -1.77
SPTA1P02549 ARAFP1-201ENST00000422172 605 ntBASIC3.99□□□□□ -1.77
SPTA1P02549 SETP6-201ENST00000479329 568 ntBASIC3.99□□□□□ -1.77
SPTA1P02549 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SPTA1P02549 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.99□□□□□ -1.77
SPTA1P02549 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC3.99□□□□□ -1.77
SPTA1P02549 AL161729.3-201ENST00000603533 673 ntBASIC3.99□□□□□ -1.77
SPTA1P02549 AC009093.8-201ENST00000641769 292 ntBASIC3.99□□□□□ -1.77
SPTA1P02549 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.99□□□□□ -1.77
SPTA1P02549 MED23-203ENST00000368058 4576 ntTSL 5 BASIC3.99□□□□□ -1.77
SPTA1P02549 AL158163.1-201ENST00000603915 1649 ntBASIC3.99□□□□□ -1.77
SPTA1P02549 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC3.99□□□□□ -1.77
SPTA1P02549 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SPTA1P02549 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SPTA1P02549 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC3.99□□□□□ -1.77
SPTA1P02549 OR51H2P-202ENST00000641424 3046 ntBASIC3.99□□□□□ -1.77
SPTA1P02549 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.99□□□□□ -1.77
SPTA1P02549 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.99□□□□□ -1.77
SPTA1P02549 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SPTA1P02549 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SPTA1P02549 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.99□□□□□ -1.77
SPTA1P02549 FCF1P5-201ENST00000406490 482 ntBASIC3.99□□□□□ -1.77
SPTA1P02549 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.99□□□□□ -1.77
SPTA1P02549 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.99□□□□□ -1.77
SPTA1P02549 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.99□□□□□ -1.77
SPTA1P02549 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.99□□□□□ -1.77
SPTA1P02549 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC3.99□□□□□ -1.77
SPTA1P02549 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.99□□□□□ -1.77
SPTA1P02549 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SPTA1P02549 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SPTA1P02549 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.98□□□□□ -1.77
SPTA1P02549 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SPTA1P02549 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC3.98□□□□□ -1.77
SPTA1P02549 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
SPTA1P02549 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.98□□□□□ -1.77
SPTA1P02549 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SPTA1P02549 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.98□□□□□ -1.77
SPTA1P02549 COX5BP7-201ENST00000414780 274 ntBASIC3.98□□□□□ -1.77
SPTA1P02549 RPL23AP52-201ENST00000439311 478 ntBASIC3.98□□□□□ -1.77
SPTA1P02549 PPIAP3-201ENST00000450588 505 ntBASIC3.98□□□□□ -1.77
SPTA1P02549 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.98□□□□□ -1.77
SPTA1P02549 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.98□□□□□ -1.77
SPTA1P02549 AC069304.1-201ENST00000491593 704 ntBASIC3.98□□□□□ -1.77
SPTA1P02549 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.98□□□□□ -1.77
SPTA1P02549 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC3.98□□□□□ -1.77
SPTA1P02549 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC3.98□□□□□ -1.77
SPTA1P02549 MIR7151-201ENST00000617477 60 ntBASIC3.98□□□□□ -1.77
SPTA1P02549 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
SPTA1P02549 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SPTA1P02549 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
SPTA1P02549 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SPTA1P02549 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SPTA1P02549 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.98□□□□□ -1.77
SPTA1P02549 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SPTA1P02549 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC3.98□□□□□ -1.77
SPTA1P02549 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.98□□□□□ -1.77
SPTA1P02549 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SPTA1P02549 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.97□□□□□ -1.77
SPTA1P02549 AC068533.1-201ENST00000418542 415 ntBASIC3.97□□□□□ -1.77
SPTA1P02549 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.97□□□□□ -1.77
SPTA1P02549 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.97□□□□□ -1.77
SPTA1P02549 RPL21P89-201ENST00000444021 467 ntBASIC3.97□□□□□ -1.77
SPTA1P02549 AC104306.1-201ENST00000449702 371 ntBASIC3.97□□□□□ -1.77
SPTA1P02549 AL133244.1-201ENST00000456007 258 ntBASIC3.97□□□□□ -1.77
SPTA1P02549 CREM-220ENST00000463314 964 ntTSL 2 BASIC3.97□□□□□ -1.77
SPTA1P02549 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.97□□□□□ -1.77
SPTA1P02549 AC004069.2-201ENST00000505438 1114 ntBASIC3.97□□□□□ -1.77
SPTA1P02549 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.97□□□□□ -1.77
SPTA1P02549 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
SPTA1P02549 RN7SKP67-201ENST00000515905 235 ntBASIC3.97□□□□□ -1.77
SPTA1P02549 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC3.97□□□□□ -1.77
SPTA1P02549 AC005412.1-201ENST00000580812 1049 ntBASIC3.97□□□□□ -1.77
SPTA1P02549 RN7SL600P-201ENST00000581811 299 ntBASIC3.97□□□□□ -1.77
SPTA1P02549 AC090181.2-201ENST00000602975 672 ntBASIC3.97□□□□□ -1.77
SPTA1P02549 AC025175.1-201ENST00000606482 759 ntBASIC3.97□□□□□ -1.77
SPTA1P02549 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SPTA1P02549 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SPTA1P02549 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.97□□□□□ -1.77
SPTA1P02549 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SPTA1P02549 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC3.97□□□□□ -1.77
SPTA1P02549 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SPTA1P02549 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SPTA1P02549 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SPTA1P02549 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.97□□□□□ -1.77
SPTA1P02549 AC068733.2-201ENST00000605434 1418 ntBASIC3.97□□□□□ -1.77
SPTA1P02549 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SPTA1P02549 SNORA5A-201ENST00000384111 134 ntBASIC3.97□□□□□ -1.77
SPTA1P02549 AC092162.1-201ENST00000432828 434 ntBASIC3.97□□□□□ -1.77
SPTA1P02549 AC006326.1-201ENST00000445465 787 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms