Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL2A1P02458 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
COL2A1P02458 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL2A1P02458 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL2A1P02458 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.08□□□□□ -1.6
COL2A1P02458 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.08□□□□□ -1.6
COL2A1P02458 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL2A1P02458 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL2A1P02458 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL2A1P02458 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
COL2A1P02458 RNA5SP36-201ENST00000410197 133 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 CRYBB2P1-203ENST00000415709 538 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 UBTFL3-201ENST00000418934 1024 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 RPL37P1-201ENST00000432310 284 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 TRIM60P13-201ENST00000432350 1283 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 AL356276.2-201ENST00000435919 558 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.07□□□□□ -1.6
COL2A1P02458 RPL5P32-201ENST00000454085 879 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.07□□□□□ -1.6
COL2A1P02458 ATP5G1P3-201ENST00000463301 410 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 UBTFL6-201ENST00000477929 1024 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 RPS4XP18-201ENST00000495480 763 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 AC104164.2-201ENST00000496953 495 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.07□□□□□ -1.6
COL2A1P02458 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.07□□□□□ -1.6
COL2A1P02458 AC108064.1-201ENST00000513791 460 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 AC019227.1-201ENST00000526902 510 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.07□□□□□ -1.6
COL2A1P02458 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL2A1P02458 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.07□□□□□ -1.6
COL2A1P02458 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.07□□□□□ -1.6
COL2A1P02458 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL2A1P02458 AP001002.1-201ENST00000625148 1513 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL2A1P02458 AC000374.1-201ENST00000434698 1745 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
COL2A1P02458 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL2A1P02458 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL2A1P02458 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL2A1P02458 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL2A1P02458 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL2A1P02458 AC005005.4-201ENST00000623789 16698 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL2A1P02458 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.07□□□□□ -1.6
COL2A1P02458 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL2A1P02458 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL2A1P02458 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.07□□□□□ -1.6
COL2A1P02458 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL2A1P02458 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL2A1P02458 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
COL2A1P02458 THAP12P5-201ENST00000405864 2275 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL2A1P02458 AL731532.2-201ENST00000623542 1953 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL2A1P02458 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL2A1P02458 AL356968.2-201ENST00000412769 1257 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.07□□□□□ -1.6
COL2A1P02458 EIF1P3-201ENST00000423841 334 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 RPL23AP25-201ENST00000430973 463 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 RPL35AP15-201ENST00000468042 339 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.07□□□□□ -1.6
COL2A1P02458 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.07□□□□□ -1.6
COL2A1P02458 KCTD9P2-201ENST00000512203 1013 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 SETP12-201ENST00000514068 805 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 AC138938.1-201ENST00000515431 782 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 SNORA48.9-201ENST00000516419 162 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 RNA5SP360-201ENST00000516555 118 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 RNU6-362P-201ENST00000516736 90 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 AC090151.1-201ENST00000520784 730 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.07□□□□□ -1.6
COL2A1P02458 AL352979.3-201ENST00000553515 247 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 RNU4-89P-201ENST00000607443 133 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.07□□□□□ -1.6
COL2A1P02458 AC005858.4-201ENST00000623191 700 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 CDRT1-208ENST00000630868 794 ntBASIC5.07□□□□□ -1.6
COL2A1P02458 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL2A1P02458 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
COL2A1P02458 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.06□□□□□ -1.6
COL2A1P02458 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
COL2A1P02458 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.06□□□□□ -1.6
COL2A1P02458 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL2A1P02458 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.06□□□□□ -1.6
COL2A1P02458 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL2A1P02458 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
COL2A1P02458 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL2A1P02458 AL133268.1-201ENST00000405676 1401 ntBASIC5.06□□□□□ -1.6
COL2A1P02458 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL2A1P02458 AC083899.2-201ENST00000423285 1376 ntBASIC5.06□□□□□ -1.6
COL2A1P02458 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
COL2A1P02458 RNU1-44P-201ENST00000384453 163 ntBASIC5.06□□□□□ -1.6
COL2A1P02458 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
COL2A1P02458 ENSAP1-201ENST00000392855 326 ntBASIC5.06□□□□□ -1.6
COL2A1P02458 AL078604.1-201ENST00000404609 466 ntBASIC5.06□□□□□ -1.6
COL2A1P02458 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.06□□□□□ -1.6
COL2A1P02458 RFESDP1-201ENST00000422350 461 ntBASIC5.06□□□□□ -1.6
COL2A1P02458 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.06□□□□□ -1.6
COL2A1P02458 RPL23AP65-201ENST00000475608 468 ntBASIC5.06□□□□□ -1.6
COL2A1P02458 AC091959.2-201ENST00000477363 321 ntBASIC5.06□□□□□ -1.6
COL2A1P02458 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms