Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.81□□□□□ -1.64
PDGFBP01127 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFBP01127 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFBP01127 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
PDGFBP01127 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFBP01127 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFBP01127 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
PDGFBP01127 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFBP01127 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFBP01127 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
PDGFBP01127 OR14L1P-202ENST00000641545 3009 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFBP01127 DDX18P3-201ENST00000404856 2007 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFBP01127 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFBP01127 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFBP01127 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.8□□□□□ -1.64
PDGFBP01127 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFBP01127 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
PDGFBP01127 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFBP01127 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFBP01127 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
PDGFBP01127 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.8□□□□□ -1.64
PDGFBP01127 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PDGFBP01127 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.8□□□□□ -1.64
PDGFBP01127 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFBP01127 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.8□□□□□ -1.64
PDGFBP01127 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFBP01127 OR5T3-201ENST00000303059 1023 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFBP01127 MIR372-201ENST00000362225 67 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 MIR554-201ENST00000384874 96 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.8□□□□□ -1.64
PDGFBP01127 RPL23AP26-201ENST00000412728 464 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.8□□□□□ -1.64
PDGFBP01127 MTATP6P19-201ENST00000413797 659 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.8□□□□□ -1.64
PDGFBP01127 OR13Z1P-201ENST00000416141 834 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFBP01127 COX6CP13-201ENST00000428703 226 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 RPS3AP54-201ENST00000435535 734 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.8□□□□□ -1.64
PDGFBP01127 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.8□□□□□ -1.64
PDGFBP01127 AL450263.2-201ENST00000439400 589 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 AC004980.3-201ENST00000447046 365 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 GAPDHP14-201ENST00000450472 937 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 BX842559.2-201ENST00000451418 605 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.8□□□□□ -1.64
PDGFBP01127 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.8□□□□□ -1.64
PDGFBP01127 RPS17P2-201ENST00000461663 408 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 RPS7P7-201ENST00000463499 571 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 RN7SL441P-201ENST00000492388 296 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 NIFKP7-201ENST00000503365 834 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 AC010627.1-201ENST00000503819 1294 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 CDH12P2-201ENST00000504393 298 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.8□□□□□ -1.64
PDGFBP01127 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.8□□□□□ -1.64
PDGFBP01127 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.8□□□□□ -1.64
PDGFBP01127 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.8□□□□□ -1.64
PDGFBP01127 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.8□□□□□ -1.64
PDGFBP01127 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFBP01127 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.8□□□□□ -1.64
PDGFBP01127 AC100814.1-201ENST00000606963 623 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PDGFBP01127 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFBP01127 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PDGFBP01127 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PDGFBP01127 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.8□□□□□ -1.64
PDGFBP01127 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.8□□□□□ -1.64
PDGFBP01127 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFBP01127 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PDGFBP01127 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PDGFBP01127 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.8□□□□□ -1.64
PDGFBP01127 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PDGFBP01127 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFBP01127 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFBP01127 AL359715.4-201ENST00000606629 1436 ntBASIC4.8□□□□□ -1.64
PDGFBP01127 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.79□□□□□ -1.64
PDGFBP01127 AC002525.1-201ENST00000624392 1622 ntBASIC4.79□□□□□ -1.64
PDGFBP01127 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFBP01127 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFBP01127 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFBP01127 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.79□□□□□ -1.64
PDGFBP01127 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFBP01127 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFBP01127 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.79□□□□□ -1.64
PDGFBP01127 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFBP01127 AL450345.1-202ENST00000605741 3881 ntBASIC4.79□□□□□ -1.64
PDGFBP01127 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PDGFBP01127 SALL4P2-201ENST00000423288 2910 ntBASIC4.79□□□□□ -1.64
PDGFBP01127 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFBP01127 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFBP01127 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFBP01127 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFBP01127 SNORA71.3-201ENST00000362582 128 ntBASIC4.79□□□□□ -1.64
PDGFBP01127 OR1L6-202ENST00000373684 1044 ntBASIC4.79□□□□□ -1.64
PDGFBP01127 RNU6-603P-201ENST00000411403 107 ntBASIC4.79□□□□□ -1.64
PDGFBP01127 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.79□□□□□ -1.64
PDGFBP01127 LINC00993-201ENST00000420453 540 ntBASIC4.79□□□□□ -1.64
PDGFBP01127 NDUFA5P10-201ENST00000432147 357 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms