Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.38□□□□□ -1.55
VPS4BO75351 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.38□□□□□ -1.55
VPS4BO75351 AC008015.1-201ENST00000555505 465 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.38□□□□□ -1.55
VPS4BO75351 AADACP1-206ENST00000561502 1193 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS4BO75351 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS4BO75351 MIR4660-201ENST00000583549 74 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS4BO75351 FKBP1AP1-201ENST00000594588 318 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AC063977.5-201ENST00000601044 974 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AC068790.7-201ENST00000602347 528 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS4BO75351 BNIP3P4-201ENST00000604946 565 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AC011939.3-201ENST00000613686 466 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS4BO75351 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS4BO75351 CASC19-264ENST00000641912 1184 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4BO75351 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4BO75351 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4BO75351 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4BO75351 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4BO75351 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS4BO75351 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS4BO75351 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VPS4BO75351 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
VPS4BO75351 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
VPS4BO75351 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS4BO75351 RNA5SP500-201ENST00000364486 119 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 RNU6-157P-201ENST00000383957 107 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 PPIAP9-201ENST00000403866 498 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 OR6E1P-201ENST00000414424 923 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS4BO75351 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 CNOT7P1-201ENST00000429006 852 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 AL022331.1-201ENST00000429025 477 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 RPL7AP49-201ENST00000429522 581 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS4BO75351 HMGB3P24-201ENST00000433260 622 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 AL591438.1-201ENST00000433508 581 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 MTCO3P5-201ENST00000433620 714 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS4BO75351 GTF2IP7-202ENST00000436677 309 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 RPL12P18-201ENST00000437175 325 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 GSTA7P-201ENST00000438425 448 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 ARAFP2-201ENST00000440565 559 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS4BO75351 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS4BO75351 RANP1-206ENST00000455094 651 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS4BO75351 RAP1BP2-201ENST00000478270 544 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS4BO75351 HIGD1AP14-201ENST00000507617 282 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS4BO75351 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS4BO75351 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS4BO75351 CDC42P3-201ENST00000518493 633 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS4BO75351 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS4BO75351 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS4BO75351 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS4BO75351 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS4BO75351 RN7SL290P-201ENST00000578661 300 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS4BO75351 MIR548Y-201ENST00000582739 110 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 AC068790.2-201ENST00000602601 557 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 AC024940.4-201ENST00000605507 246 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.37□□□□□ -1.55
VPS4BO75351 AL135786.2-201ENST00000608422 615 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 AL121612.2-201ENST00000612261 482 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 AC007204.2-201ENST00000615022 616 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 CU639417.4-201ENST00000623928 207 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS4BO75351 LINC01963-201ENST00000562038 3148 ntBASIC5.37□□□□□ -1.55
VPS4BO75351 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
VPS4BO75351 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS4BO75351 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
VPS4BO75351 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms