Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AL354950.1-201ENST00000614150 568 ntBASIC4.05□□□□□ -1.76
SGCEO43556 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.05□□□□□ -1.76
SGCEO43556 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.05□□□□□ -1.76
SGCEO43556 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.05□□□□□ -1.76
SGCEO43556 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SGCEO43556 AL391684.1-202ENST00000641293 1636 ntBASIC4.05□□□□□ -1.76
SGCEO43556 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SGCEO43556 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SGCEO43556 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SGCEO43556 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SGCEO43556 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
SGCEO43556 AC135352.1-201ENST00000506173 1418 ntBASIC4.04□□□□□ -1.76
SGCEO43556 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SGCEO43556 ZNF137P-201ENST00000456718 1920 ntBASIC4.04□□□□□ -1.76
SGCEO43556 AL590240.1-201ENST00000334118 313 ntBASIC4.04□□□□□ -1.76
SGCEO43556 RNU6-225P-201ENST00000384613 103 ntBASIC4.04□□□□□ -1.76
SGCEO43556 MIR550A3-201ENST00000390735 95 ntBASIC4.04□□□□□ -1.76
SGCEO43556 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SGCEO43556 MIR298-201ENST00000401212 88 ntBASIC4.04□□□□□ -1.76
SGCEO43556 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SGCEO43556 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.04□□□□□ -1.76
SGCEO43556 AC019050.1-201ENST00000418508 492 ntBASIC4.04□□□□□ -1.76
SGCEO43556 Z74021.1-201ENST00000423610 407 ntBASIC4.04□□□□□ -1.76
SGCEO43556 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.04□□□□□ -1.76
SGCEO43556 RPS6P12-201ENST00000432491 726 ntBASIC4.04□□□□□ -1.76
SGCEO43556 AL353748.1-201ENST00000440753 474 ntBASIC4.04□□□□□ -1.76
SGCEO43556 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.04□□□□□ -1.76
SGCEO43556 AC108463.1-201ENST00000450258 347 ntBASIC4.04□□□□□ -1.76
SGCEO43556 AL935212.3-201ENST00000450729 284 ntBASIC4.04□□□□□ -1.76
SGCEO43556 RN7SL826P-201ENST00000479724 288 ntBASIC4.04□□□□□ -1.76
SGCEO43556 AC083982.1-201ENST00000485679 344 ntBASIC4.04□□□□□ -1.76
SGCEO43556 AC011005.3-201ENST00000491624 395 ntBASIC4.04□□□□□ -1.76
SGCEO43556 AC146944.2-203ENST00000502493 354 ntBASIC4.04□□□□□ -1.76
SGCEO43556 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SGCEO43556 AC139495.1-202ENST00000513164 354 ntBASIC4.04□□□□□ -1.76
SGCEO43556 VTA1P2-201ENST00000520205 911 ntBASIC4.04□□□□□ -1.76
SGCEO43556 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SGCEO43556 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.04□□□□□ -1.76
SGCEO43556 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.04□□□□□ -1.76
SGCEO43556 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.04□□□□□ -1.76
SGCEO43556 AC091178.1-203ENST00000584586 279 ntBASIC4.04□□□□□ -1.76
SGCEO43556 OR1AB1P-201ENST00000585564 761 ntBASIC4.04□□□□□ -1.76
SGCEO43556 AC008536.1-201ENST00000602872 669 ntBASIC4.04□□□□□ -1.76
SGCEO43556 AC008966.2-201ENST00000606157 453 ntBASIC4.04□□□□□ -1.76
SGCEO43556 AC074276.2-201ENST00000619891 348 ntBASIC4.04□□□□□ -1.76
SGCEO43556 U3.53-201ENST00000628922 216 ntBASIC4.04□□□□□ -1.76
SGCEO43556 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SGCEO43556 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SGCEO43556 AL031985.3-201ENST00000565390 2449 ntBASIC4.04□□□□□ -1.76
SGCEO43556 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SGCEO43556 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SGCEO43556 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SGCEO43556 PNPT1P2-201ENST00000456768 2050 ntBASIC4.04□□□□□ -1.76
SGCEO43556 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.04□□□□□ -1.76
SGCEO43556 AC114546.3-201ENST00000623582 1734 ntBASIC4.04□□□□□ -1.76
SGCEO43556 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SGCEO43556 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SGCEO43556 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SGCEO43556 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SGCEO43556 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SGCEO43556 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.03□□□□□ -1.76
SGCEO43556 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.03□□□□□ -1.76
SGCEO43556 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SGCEO43556 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
SGCEO43556 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SGCEO43556 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SGCEO43556 RNA5SP52-201ENST00000362448 134 ntBASIC4.03□□□□□ -1.76
SGCEO43556 RNU1-20P-201ENST00000363314 162 ntBASIC4.03□□□□□ -1.76
SGCEO43556 MIR93-201ENST00000385024 80 ntBASIC4.03□□□□□ -1.76
SGCEO43556 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SGCEO43556 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.03□□□□□ -1.76
SGCEO43556 CYP4F29P-201ENST00000420685 446 ntBASIC4.03□□□□□ -1.76
SGCEO43556 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SGCEO43556 RPL12P34-201ENST00000424532 479 ntBASIC4.03□□□□□ -1.76
SGCEO43556 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SGCEO43556 PPIAP13-201ENST00000434706 478 ntBASIC4.03□□□□□ -1.76
SGCEO43556 OR6C72P-201ENST00000451403 892 ntBASIC4.03□□□□□ -1.76
SGCEO43556 IFNWP4-201ENST00000453148 294 ntBASIC4.03□□□□□ -1.76
SGCEO43556 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.03□□□□□ -1.76
SGCEO43556 ISCUP1-201ENST00000454451 448 ntBASIC4.03□□□□□ -1.76
SGCEO43556 RN7SL610P-201ENST00000463845 291 ntBASIC4.03□□□□□ -1.76
SGCEO43556 AC022336.1-201ENST00000475510 337 ntBASIC4.03□□□□□ -1.76
SGCEO43556 RN7SL41P-201ENST00000476144 297 ntBASIC4.03□□□□□ -1.76
SGCEO43556 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SGCEO43556 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SGCEO43556 AC090819.1-201ENST00000523800 1111 ntBASIC4.03□□□□□ -1.76
SGCEO43556 OR5D15P-201ENST00000531671 942 ntBASIC4.03□□□□□ -1.76
SGCEO43556 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.03□□□□□ -1.76
SGCEO43556 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SGCEO43556 AC087888.1-201ENST00000550884 1254 ntBASIC4.03□□□□□ -1.76
SGCEO43556 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.03□□□□□ -1.76
SGCEO43556 AC051619.2-201ENST00000559063 397 ntBASIC4.03□□□□□ -1.76
SGCEO43556 AC105129.1-201ENST00000560250 297 ntBASIC4.03□□□□□ -1.76
SGCEO43556 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.03□□□□□ -1.76
SGCEO43556 MTND6P33-201ENST00000571794 183 ntBASIC4.03□□□□□ -1.76
SGCEO43556 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.03□□□□□ -1.76
SGCEO43556 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
SGCEO43556 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.03□□□□□ -1.76
SGCEO43556 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.03□□□□□ -1.76
SGCEO43556 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms