Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PHGDHO43175 AC108734.3-201ENST00000481241 1165 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.35□□□□□ -1.55
PHGDHO43175 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.35□□□□□ -1.55
PHGDHO43175 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.35□□□□□ -1.55
PHGDHO43175 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 AP004607.2-201ENST00000533949 322 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.35□□□□□ -1.55
PHGDHO43175 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.35□□□□□ -1.55
PHGDHO43175 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.35□□□□□ -1.55
PHGDHO43175 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PHGDHO43175 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.35□□□□□ -1.55
PHGDHO43175 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.35□□□□□ -1.55
PHGDHO43175 BNIP3P26-201ENST00000600827 554 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.35□□□□□ -1.55
PHGDHO43175 AC027243.2-201ENST00000602530 724 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 AL390816.3-201ENST00000604527 1066 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 AL355816.1-201ENST00000607951 118 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.35□□□□□ -1.55
PHGDHO43175 AL139407.1-201ENST00000613826 1175 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 AC008115.3-201ENST00000614874 549 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 CR392039.4-201ENST00000624968 501 ntBASIC5.35□□□□□ -1.55
PHGDHO43175 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.35□□□□□ -1.55
PHGDHO43175 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHGDHO43175 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PHGDHO43175 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PHGDHO43175 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PHGDHO43175 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PHGDHO43175 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.35□□□□□ -1.55
PHGDHO43175 HSPA8P14-201ENST00000552265 1805 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PHGDHO43175 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PHGDHO43175 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PHGDHO43175 AC022031.1-201ENST00000585985 2593 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.34□□□□□ -1.55
PHGDHO43175 DDX18P5-201ENST00000534547 1306 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PHGDHO43175 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PHGDHO43175 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 OR5H2-201ENST00000355273 945 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PHGDHO43175 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.34□□□□□ -1.55
PHGDHO43175 AC023490.2-201ENST00000359859 470 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PHGDHO43175 SNORD116-8-201ENST00000384365 95 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 AL356131.1-201ENST00000405826 414 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 RNU6-272P-201ENST00000411028 104 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 HMGN1P20-201ENST00000411849 300 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 RAP1BP1-201ENST00000412709 553 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 NRBF2P2-201ENST00000413087 861 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 PAICSP7-201ENST00000419829 962 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 RPS3P2-201ENST00000421346 701 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.34□□□□□ -1.55
PHGDHO43175 USP9YP31-201ENST00000431405 881 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.34□□□□□ -1.55
PHGDHO43175 SEPT7P5-201ENST00000434048 306 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PHGDHO43175 AC092647.3-201ENST00000443044 633 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.34□□□□□ -1.55
PHGDHO43175 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.34□□□□□ -1.55
PHGDHO43175 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.34□□□□□ -1.55
PHGDHO43175 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.34□□□□□ -1.55
PHGDHO43175 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.34□□□□□ -1.55
PHGDHO43175 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.34□□□□□ -1.55
PHGDHO43175 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 AC109471.1-201ENST00000511631 612 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 AC008494.2-201ENST00000514544 370 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PHGDHO43175 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.34□□□□□ -1.55
PHGDHO43175 AP000619.3-201ENST00000535634 1127 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PHGDHO43175 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.34□□□□□ -1.55
PHGDHO43175 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.34□□□□□ -1.55
PHGDHO43175 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.34□□□□□ -1.55
PHGDHO43175 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.34□□□□□ -1.55
PHGDHO43175 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.34□□□□□ -1.55
PHGDHO43175 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.34□□□□□ -1.55
PHGDHO43175 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PHGDHO43175 AC100767.2-201ENST00000604840 693 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 AC093783.1-201ENST00000612976 329 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 OR2L1P-202ENST00000641567 1023 ntBASIC5.34□□□□□ -1.55
PHGDHO43175 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
PHGDHO43175 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PHGDHO43175 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
PHGDHO43175 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PHGDHO43175 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
PHGDHO43175 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
PHGDHO43175 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PHGDHO43175 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.34□□□□□ -1.56
PHGDHO43175 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
PHGDHO43175 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.34□□□□□ -1.56
PHGDHO43175 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHGDHO43175 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.33□□□□□ -1.56
PHGDHO43175 TRIM51GP-201ENST00000534741 1350 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PHGDHO43175 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.33□□□□□ -1.56
PHGDHO43175 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHGDHO43175 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.33□□□□□ -1.56
PHGDHO43175 RNU6-839P-201ENST00000363347 108 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms