Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.4□□□□□ -1.54
RGPD3A6NKT7 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RGPD3A6NKT7 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.4□□□□□ -1.54
RGPD3A6NKT7 RPEP2-201ENST00000432149 701 ntBASIC5.4□□□□□ -1.54
RGPD3A6NKT7 AL159987.2-201ENST00000432754 307 ntBASIC5.4□□□□□ -1.54
RGPD3A6NKT7 CYCSP32-201ENST00000440548 321 ntBASIC5.4□□□□□ -1.54
RGPD3A6NKT7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.4□□□□□ -1.54
RGPD3A6NKT7 SERPINA7P1-201ENST00000443077 631 ntBASIC5.4□□□□□ -1.54
RGPD3A6NKT7 AL358832.1-201ENST00000497800 389 ntBASIC5.4□□□□□ -1.54
RGPD3A6NKT7 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.4□□□□□ -1.54
RGPD3A6NKT7 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.4□□□□□ -1.54
RGPD3A6NKT7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.4□□□□□ -1.54
RGPD3A6NKT7 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RGPD3A6NKT7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
RGPD3A6NKT7 AL356274.2-201ENST00000624379 3752 ntBASIC5.4□□□□□ -1.55
RGPD3A6NKT7 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RGPD3A6NKT7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.4□□□□□ -1.55
RGPD3A6NKT7 AC011755.1-201ENST00000623763 2049 ntBASIC5.4□□□□□ -1.55
RGPD3A6NKT7 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RGPD3A6NKT7 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
RGPD3A6NKT7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 HSPE1P12-201ENST00000412576 301 ntBASIC5.39□□□□□ -1.55
RGPD3A6NKT7 AC115115.1-201ENST00000449927 248 ntBASIC5.39□□□□□ -1.55
RGPD3A6NKT7 GAPDHP36-201ENST00000480688 918 ntBASIC5.39□□□□□ -1.55
RGPD3A6NKT7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 AL603750.1-201ENST00000624216 1717 ntBASIC5.39□□□□□ -1.55
RGPD3A6NKT7 MTND5P1-201ENST00000445440 1375 ntBASIC5.39□□□□□ -1.55
RGPD3A6NKT7 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 RPL21P17-201ENST00000397467 475 ntBASIC5.39□□□□□ -1.55
RGPD3A6NKT7 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 OR5BE1P-201ENST00000425977 939 ntBASIC5.39□□□□□ -1.55
RGPD3A6NKT7 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 BTF3P6-201ENST00000448054 499 ntBASIC5.39□□□□□ -1.55
RGPD3A6NKT7 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 AC106782.4-201ENST00000568264 210 ntBASIC5.39□□□□□ -1.55
RGPD3A6NKT7 AC005255.1-201ENST00000593748 216 ntBASIC5.39□□□□□ -1.55
RGPD3A6NKT7 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.39□□□□□ -1.55
RGPD3A6NKT7 OR5BE1P-202ENST00000641168 1176 ntBASIC5.39□□□□□ -1.55
RGPD3A6NKT7 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 ZNF962P-201ENST00000443465 3140 ntBASIC5.38□□□□□ -1.55
RGPD3A6NKT7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 AL355852.1-201ENST00000454081 1771 ntBASIC5.38□□□□□ -1.55
RGPD3A6NKT7 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 RNA5SP175-201ENST00000364275 119 ntBASIC5.38□□□□□ -1.55
RGPD3A6NKT7 AC007066.1-201ENST00000392902 381 ntBASIC5.38□□□□□ -1.55
RGPD3A6NKT7 AL450992.3-201ENST00000413192 568 ntBASIC5.38□□□□□ -1.55
RGPD3A6NKT7 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 PRDX3P3-201ENST00000447765 522 ntBASIC5.38□□□□□ -1.55
RGPD3A6NKT7 VN1R32P-201ENST00000452234 905 ntBASIC5.38□□□□□ -1.55
RGPD3A6NKT7 AC018635.1-201ENST00000468292 1030 ntBASIC5.38□□□□□ -1.55
RGPD3A6NKT7 WBP1LP4-201ENST00000505043 344 ntBASIC5.38□□□□□ -1.55
RGPD3A6NKT7 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 YPEL5P3-201ENST00000547227 352 ntBASIC5.38□□□□□ -1.55
RGPD3A6NKT7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 AP002360.3-201ENST00000607673 710 ntBASIC5.38□□□□□ -1.55
RGPD3A6NKT7 AC007546.2-201ENST00000623996 360 ntBASIC5.38□□□□□ -1.55
RGPD3A6NKT7 AL034408.1-202ENST00000636088 415 ntBASIC5.38□□□□□ -1.55
RGPD3A6NKT7 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 AC100778.3-201ENST00000580060 1750 ntBASIC5.38□□□□□ -1.55
RGPD3A6NKT7 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RGPD3A6NKT7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RGPD3A6NKT7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
RGPD3A6NKT7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RGPD3A6NKT7 Y_RNA.111-201ENST00000363248 100 ntBASIC5.37□□□□□ -1.55
RGPD3A6NKT7 RNA5SP22-201ENST00000365393 109 ntBASIC5.37□□□□□ -1.55
RGPD3A6NKT7 RNA5SP151-201ENST00000365632 117 ntBASIC5.37□□□□□ -1.55
RGPD3A6NKT7 RNU2-65P-201ENST00000410162 185 ntBASIC5.37□□□□□ -1.55
RGPD3A6NKT7 CTSL3P-202ENST00000412179 788 ntBASIC5.37□□□□□ -1.55
RGPD3A6NKT7 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.37□□□□□ -1.55
RGPD3A6NKT7 PDSS1P2-201ENST00000449397 678 ntBASIC5.37□□□□□ -1.55
RGPD3A6NKT7 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms