Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGC4Q9Y5F7 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGC4Q9Y5F7 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.71□□□□□ -1.33
PCDHGC4Q9Y5F7 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGC4Q9Y5F7 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
PCDHGC4Q9Y5F7 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGC4Q9Y5F7 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 OR11H4-201ENST00000315409 1082 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AC011155.1-201ENST00000316512 456 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 Y_RNA.259-201ENST00000364619 101 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 RNU1-39P-201ENST00000383897 165 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 Y_RNA.387-201ENST00000383918 102 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 SNORA32.2-201ENST00000384049 122 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 SNORD116-23-201ENST00000384645 92 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 RNU6-510P-201ENST00000391239 108 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AL450338.1-201ENST00000407987 512 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 RNU2-39P-201ENST00000410604 198 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 MTCYBP8-201ENST00000422855 651 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 RPL36AP53-201ENST00000432891 316 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AC002504.1-201ENST00000438281 691 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 GTF2IP13-201ENST00000438487 386 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 GAPDHP33-201ENST00000443168 1013 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 RPL17P49-201ENST00000443728 411 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 RPL31P44-201ENST00000447680 377 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 RPL7P59-201ENST00000447700 943 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 RPL17P2-201ENST00000491913 451 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 RNU6-123P-201ENST00000516163 102 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 HMGB1P23-201ENST00000518743 568 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 OR5B19P-201ENST00000531766 928 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AC005519.1-201ENST00000554490 601 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AC110588.1-201ENST00000559699 137 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AC106785.4-201ENST00000569492 412 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AP001180.3-201ENST00000582221 145 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AC245052.7-201ENST00000601161 359 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 SNORD96A-201ENST00000606577 79 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AP004247.3-201ENST00000608682 624 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 LPAL2-203ENST00000454031 2498 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AC007998.4-201ENST00000612496 2533 ntBASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGC4Q9Y5F7 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 ZNF658B-201ENST00000602828 3408 ntBASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 LINC00622-201ENST00000562811 1570 ntBASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 PPIAP24-201ENST00000328558 471 ntBASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 Y_RNA.184-201ENST00000363884 108 ntBASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 SNORA69-201ENST00000383895 132 ntBASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 SNORD115.1-201ENST00000391109 76 ntBASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 RPL5P18-201ENST00000406671 891 ntBASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 MIR1303-201ENST00000408625 86 ntBASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 MTND3P8-201ENST00000412909 339 ntBASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 SNRPFP1-201ENST00000414761 252 ntBASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 ELOCP4-201ENST00000420090 333 ntBASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC6.7□□□□□ -1.34
PCDHGC4Q9Y5F7 USP9YP16-201ENST00000430287 407 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms