Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 AL591848.4-201ENST00000567832 3472 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 AL359976.1-201ENST00000418655 3528 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 LINC00561-201ENST00000565815 2738 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CNTN3Q9P232 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CNTN3Q9P232 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CNTN3Q9P232 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CNTN3Q9P232 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CNTN3Q9P232 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 OR4K15-201ENST00000305051 1216 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 RNA5SP433-201ENST00000364491 114 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 SNORA62.2-201ENST00000364672 152 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 HMGB3P7-201ENST00000400214 611 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 ERMN-204ENST00000409925 556 ntTSL 4 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CNTN3Q9P232 FCF1P2-201ENST00000415284 583 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 TMBIM7P-201ENST00000418074 855 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 RPL21P111-201ENST00000418453 477 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 ELOCP14-201ENST00000428070 331 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 BMS1P19-201ENST00000433925 393 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 CACYBPP1-201ENST00000438592 684 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 ELOCP7-201ENST00000439968 331 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 RABEPKP1-201ENST00000440529 1026 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 PPIAP7-201ENST00000454070 489 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 RPL18AP17-201ENST00000455326 198 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 RANP2-201ENST00000456833 229 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 AC009963.3-201ENST00000458090 486 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 AC090958.1-201ENST00000511122 351 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 IGKV3D-25-201ENST00000519599 235 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 AP000620.1-201ENST00000527147 504 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 AC018558.5-201ENST00000565840 952 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CNTN3Q9P232 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 AC091193.1-201ENST00000604640 448 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CNTN3Q9P232 FAM27E2-201ENST00000619668 403 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 MIR1910-201ENST00000636955 80 ntBASIC6.75□□□□□ -1.33
CNTN3Q9P232 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CNTN3Q9P232 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CNTN3Q9P232 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CNTN3Q9P232 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CNTN3Q9P232 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CNTN3Q9P232 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CNTN3Q9P232 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.75□□□□□ -1.33
CNTN3Q9P232 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CNTN3Q9P232 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CNTN3Q9P232 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CNTN3Q9P232 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CNTN3Q9P232 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CNTN3Q9P232 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CNTN3Q9P232 ZNF37BP-203ENST00000452306 1352 ntBASIC6.74□□□□□ -1.33
CNTN3Q9P232 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
CNTN3Q9P232 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CNTN3Q9P232 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CNTN3Q9P232 SNORA51.9-201ENST00000384295 124 ntBASIC6.74□□□□□ -1.33
CNTN3Q9P232 RNU6-1122P-201ENST00000384449 107 ntBASIC6.74□□□□□ -1.33
CNTN3Q9P232 RN7SKP240-201ENST00000410583 375 ntBASIC6.74□□□□□ -1.33
CNTN3Q9P232 RNU4-64P-201ENST00000410795 131 ntBASIC6.74□□□□□ -1.33
CNTN3Q9P232 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC6.74□□□□□ -1.33
CNTN3Q9P232 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms