Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 OR2L1P-202ENST00000641567 1023 ntBASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 AL133268.1-201ENST00000405676 1401 ntBASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 NCLP2-201ENST00000416078 1462 ntBASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 DDX18P3-201ENST00000404856 2007 ntBASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.36□□□□□ -1.55
BLOC1S4Q9NUP1 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 AC022031.1-201ENST00000585985 2593 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 MAPK10-304ENST00000641341 3984 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 RNU4-44P-201ENST00000363050 141 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 RPL31P52-201ENST00000407532 367 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 EIF4A1P3-201ENST00000411521 244 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 AC114755.2-201ENST00000413520 361 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 AC092570.3-201ENST00000420113 693 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 AC073310.1-201ENST00000423226 1033 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 UBE2D3P3-201ENST00000426992 425 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 MTCO1P43-201ENST00000431831 488 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 RPL7P61-201ENST00000451721 751 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 AC010683.1-201ENST00000473673 378 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 AC091868.1-201ENST00000508746 304 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 BNIP3P1-201ENST00000547295 580 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 MTND4LP24-201ENST00000572277 291 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 MIR4716-201ENST00000579628 84 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 AC124283.4-201ENST00000581815 456 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 AC211433.2-201ENST00000608433 387 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 AC245100.7-201ENST00000609678 442 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 STMN1P1-201ENST00000617809 440 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 CDRT1-208ENST00000630868 794 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 SEC63P2-201ENST00000503863 1939 ntBASIC5.35□□□□□ -1.55
BLOC1S4Q9NUP1 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AL138820.1-201ENST00000617901 5305 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AC104118.1-201ENST00000607625 1589 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 VN2R3P-201ENST00000422626 1412 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 RN7SKP149-201ENST00000363008 344 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 RSU1P3-201ENST00000412878 835 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 HMGB3P31-201ENST00000413333 595 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 EIF4A1P1-201ENST00000420241 934 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AC007394.1-201ENST00000421941 531 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AL512661.1-201ENST00000434586 1253 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 ARL5AP2-201ENST00000444698 533 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 EEF1A1P1-201ENST00000447052 739 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 HIGD1AP8-201ENST00000453927 274 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 RPL32P9-201ENST00000487963 407 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AP000676.2-201ENST00000529711 301 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 BGLT3-201ENST00000564523 994 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AC115085.1-201ENST00000588924 229 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms