Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
BRF2Q9HAW0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
BRF2Q9HAW0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.9□□□□□ -1.62
BRF2Q9HAW0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.9□□□□□ -1.62
BRF2Q9HAW0 ASNSP1-204ENST00000641977 1664 ntBASIC4.9□□□□□ -1.62
BRF2Q9HAW0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.9□□□□□ -1.62
BRF2Q9HAW0 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
BRF2Q9HAW0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 SNORA17.1-201ENST00000362945 126 ntBASIC4.9□□□□□ -1.63
BRF2Q9HAW0 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AC092638.1-201ENST00000411966 1275 ntBASIC4.9□□□□□ -1.63
BRF2Q9HAW0 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AC004854.1-201ENST00000440356 349 ntBASIC4.9□□□□□ -1.63
BRF2Q9HAW0 PCNPP2-201ENST00000441651 455 ntBASIC4.9□□□□□ -1.63
BRF2Q9HAW0 RPL7AP61-201ENST00000443410 636 ntBASIC4.9□□□□□ -1.63
BRF2Q9HAW0 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AC011225.1-201ENST00000457751 369 ntBASIC4.9□□□□□ -1.63
BRF2Q9HAW0 OR52A4P-201ENST00000472867 958 ntBASIC4.9□□□□□ -1.63
BRF2Q9HAW0 OR2AO1P-201ENST00000476497 403 ntBASIC4.9□□□□□ -1.63
BRF2Q9HAW0 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AC096571.1-202ENST00000506634 735 ntBASIC4.9□□□□□ -1.63
BRF2Q9HAW0 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 IGKV2-18-201ENST00000522607 343 ntBASIC4.9□□□□□ -1.63
BRF2Q9HAW0 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 LRRC6P1-201ENST00000532188 885 ntBASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AC006518.2-201ENST00000542513 940 ntBASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 MIR4716-201ENST00000579628 84 ntBASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AC011840.5-201ENST00000582125 771 ntBASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AC009948.4-201ENST00000604692 675 ntBASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AL050303.3-201ENST00000613704 284 ntBASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AL353726.1-201ENST00000614041 1000 ntBASIC4.9□□□□□ -1.63
BRF2Q9HAW0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 CASC19-204ENST00000641001 2055 ntBASIC4.9□□□□□ -1.63
BRF2Q9HAW0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BRF2Q9HAW0 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AC100778.3-201ENST00000580060 1750 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AP000568.1-201ENST00000282964 442 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 RN7SKP224-201ENST00000364140 325 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 RNU6-77P-201ENST00000410554 91 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 NPM1P4-201ENST00000414095 812 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AC114814.2-201ENST00000419195 485 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AL031736.2-201ENST00000426573 787 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 RPL12P28-201ENST00000430852 489 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 CFL1P1-202ENST00000432948 411 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 RPL12P11-201ENST00000439970 501 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AC104109.1-201ENST00000498563 436 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 IGKV3D-34-201ENST00000522638 302 ntBASIC4.89□□□□□ -1.63
BRF2Q9HAW0 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.89□□□□□ -1.63
BRF2Q9HAW0 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms