Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SNX6P1-201ENST00000601728 1224 ntBASIC4.71□□□□□ -1.66
RPRD1AQ96P16 COX6CP4-201ENST00000605798 228 ntBASIC4.71□□□□□ -1.66
RPRD1AQ96P16 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 AC079298.2-201ENST00000623885 459 ntBASIC4.71□□□□□ -1.66
RPRD1AQ96P16 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 OR56B2P-201ENST00000317102 954 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 RNU4-7P-201ENST00000364758 141 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 SNORA56-201ENST00000383966 129 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 MIR659-201ENST00000384963 97 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 MIR129-1-201ENST00000384972 72 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AC093719.1-202ENST00000392735 373 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 SDHCP2-201ENST00000398565 501 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AL136131.1-201ENST00000406079 803 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AC099336.2-201ENST00000422457 254 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 RPEP3-201ENST00000425462 676 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 IPMKP1-201ENST00000425988 855 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 DNAJC19P7-201ENST00000428811 344 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 RPL23AP1-201ENST00000428990 471 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 CNOT7P1-201ENST00000429006 852 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AC069277.2-201ENST00000454211 432 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 C1DP3-201ENST00000455013 423 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AC099560.2-201ENST00000457554 255 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 EIF2S2P5-201ENST00000457635 968 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 CYCSP34-201ENST00000458172 304 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AC147055.1-201ENST00000509261 750 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 HMGB3P13-201ENST00000511263 607 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 RN7SL176P-201ENST00000580352 264 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 RPL12P25-202ENST00000598100 674 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AC068790.4-201ENST00000602474 263 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AC005520.3-201ENST00000602874 370 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AC007620.3-201ENST00000608131 497 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AP005019.3-201ENST00000620418 560 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 LINC01808-202ENST00000641680 1116 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AC006971.1-201ENST00000407916 4486 ntBASIC4.7□□□□□ -1.66
RPRD1AQ96P16 AC092079.1-201ENST00000558620 1985 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RPRD1AQ96P16 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
RPRD1AQ96P16 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPRD1AQ96P16 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPRD1AQ96P16 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.69□□□□□ -1.66
RPRD1AQ96P16 EIF4A1P1-201ENST00000420241 934 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.69□□□□□ -1.66
RPRD1AQ96P16 AC068287.1-201ENST00000430283 295 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 RPS26P2-201ENST00000440331 348 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 TXNP2-201ENST00000443918 295 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 AL031584.1-201ENST00000447169 754 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RPRD1AQ96P16 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.69□□□□□ -1.66
RPRD1AQ96P16 snoU13.1-201ENST00000459157 104 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 RPL7AP28-201ENST00000464513 571 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.69□□□□□ -1.66
RPRD1AQ96P16 PGBD4P4-201ENST00000509673 613 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RPRD1AQ96P16 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.69□□□□□ -1.66
RPRD1AQ96P16 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.69□□□□□ -1.66
RPRD1AQ96P16 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.69□□□□□ -1.66
RPRD1AQ96P16 AC084783.1-201ENST00000565846 910 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 AC027281.1-201ENST00000574178 758 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 MIR4715-201ENST00000584117 79 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 ADAD1P2-201ENST00000588476 646 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 AC008782.1-201ENST00000603386 430 ntBASIC4.69□□□□□ -1.66
RPRD1AQ96P16 AC008745.1-201ENST00000604064 271 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms