Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 EIF2AP4-201ENST00000424793 1781 ntBASIC4.54□□□□□ -1.68
PTP4A1Q93096 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTP4A1Q93096 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTP4A1Q93096 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PTP4A1Q93096 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PTP4A1Q93096 ENSAP3-201ENST00000312710 333 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 MIR600-201ENST00000385007 98 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 AC092642.1-201ENST00000392417 425 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTP4A1Q93096 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 AL391361.1-201ENST00000405580 489 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 MIR1286-201ENST00000408112 78 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 QRSL1P2-201ENST00000418582 964 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 E2F6P2-201ENST00000420708 748 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 GAPDHP49-201ENST00000421421 961 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 AC079355.1-201ENST00000421770 223 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 VN1R42P-201ENST00000424651 344 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 AC008065.1-201ENST00000428525 348 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 NPM1P34-201ENST00000428821 893 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 ELOCP6-201ENST00000429066 328 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 AC093166.2-201ENST00000455969 1017 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 Z92846.1-201ENST00000456203 268 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 ELOCP12-201ENST00000458706 328 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 AC090686.1-201ENST00000481577 749 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 RNA5SP249-201ENST00000516127 99 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 AC083923.1-201ENST00000523708 376 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 PTP4A1P6-201ENST00000531034 478 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTP4A1Q93096 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PTP4A1Q93096 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 ATP5F1P7-201ENST00000567330 760 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 AC027455.1-201ENST00000574104 594 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 AC109309.2-201ENST00000612597 332 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 AL158196.1-201ENST00000616786 434 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 AC234782.5-201ENST00000617723 324 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 AC017104.5-201ENST00000637647 639 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 AC138393.1-206ENST00000540997 1886 ntBASIC4.53□□□□□ -1.68
PTP4A1Q93096 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.53□□□□□ -1.68
PTP4A1Q93096 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTP4A1Q93096 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTP4A1Q93096 ERCC6-202ENST00000374127 1782 ntBASIC4.53□□□□□ -1.69
PTP4A1Q93096 Z95331.1-201ENST00000623075 23112 ntBASIC4.52□□□□□ -1.69
PTP4A1Q93096 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTP4A1Q93096 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTP4A1Q93096 AP001002.1-201ENST00000625148 1513 ntBASIC4.52□□□□□ -1.69
PTP4A1Q93096 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTP4A1Q93096 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PTP4A1Q93096 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTP4A1Q93096 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PTP4A1Q93096 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PTP4A1Q93096 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTP4A1Q93096 ZNF33CP-201ENST00000432492 2030 ntBASIC4.52□□□□□ -1.69
PTP4A1Q93096 XPOTP1-201ENST00000443317 2398 ntBASIC4.52□□□□□ -1.69
PTP4A1Q93096 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTP4A1Q93096 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.52□□□□□ -1.69
PTP4A1Q93096 RN7SKP269-201ENST00000365545 319 ntBASIC4.52□□□□□ -1.69
PTP4A1Q93096 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.52□□□□□ -1.69
PTP4A1Q93096 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.52□□□□□ -1.69
PTP4A1Q93096 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.52□□□□□ -1.69
PTP4A1Q93096 TMBIM7P-201ENST00000418074 855 ntBASIC4.52□□□□□ -1.69
PTP4A1Q93096 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.52□□□□□ -1.69
PTP4A1Q93096 MTATP6P11-201ENST00000428071 670 ntBASIC4.52□□□□□ -1.69
PTP4A1Q93096 CDY14P-201ENST00000431260 1014 ntBASIC4.52□□□□□ -1.69
PTP4A1Q93096 BX323845.1-201ENST00000432417 179 ntBASIC4.52□□□□□ -1.69
PTP4A1Q93096 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.52□□□□□ -1.69
PTP4A1Q93096 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.52□□□□□ -1.69
PTP4A1Q93096 AC074367.1-201ENST00000438685 1125 ntBASIC4.52□□□□□ -1.69
PTP4A1Q93096 CDY12P-201ENST00000440679 1015 ntBASIC4.52□□□□□ -1.69
PTP4A1Q93096 CDY13P-201ENST00000445813 1015 ntBASIC4.52□□□□□ -1.69
PTP4A1Q93096 CDY23P-201ENST00000451661 1014 ntBASIC4.52□□□□□ -1.69
PTP4A1Q93096 GYG1P1-201ENST00000460864 698 ntBASIC4.52□□□□□ -1.69
PTP4A1Q93096 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.52□□□□□ -1.69
PTP4A1Q93096 AC112206.1-201ENST00000468416 477 ntBASIC4.52□□□□□ -1.69
PTP4A1Q93096 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.52□□□□□ -1.69
PTP4A1Q93096 S100A11P1-201ENST00000477525 312 ntBASIC4.52□□□□□ -1.69
PTP4A1Q93096 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.52□□□□□ -1.69
PTP4A1Q93096 AC024558.1-201ENST00000505008 528 ntBASIC4.52□□□□□ -1.69
PTP4A1Q93096 AC073358.1-201ENST00000505671 684 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms