Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 MIR6809-201ENST00000612189 116 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AL136228.1-201ENST00000622221 319 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AL162377.2-201ENST00000624532 337 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 MIR1321-201ENST00000637766 79 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AC005034.3-201ENST00000604845 1747 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 HSPA8P17-201ENST00000427029 1382 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 ICE2P1-201ENST00000512800 1849 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 RNA5SP273-201ENST00000362484 113 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 RNA5SP477-201ENST00000362639 119 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 RNA5SP375-201ENST00000362975 119 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 RNU6-353P-201ENST00000364266 108 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 RNU6-877P-201ENST00000383868 107 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 TAF9BP1-201ENST00000396646 746 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 RNA5SP80-201ENST00000410475 111 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 PIGPP2-201ENST00000411569 458 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 USP9YP27-201ENST00000418455 438 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AL592293.2-201ENST00000422292 996 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AC005189.1-201ENST00000431286 310 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AC007563.3-201ENST00000433233 371 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 SDCBPP1-201ENST00000440192 890 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AL592437.1-201ENST00000443781 492 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 TRBV8-1-201ENST00000481590 279 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 RPS4XP15-201ENST00000489210 795 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AP003396.4-201ENST00000527574 265 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AC004825.1-201ENST00000555068 586 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 7SK.7-201ENST00000603504 247 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AL161729.4-201ENST00000604650 476 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 MEMO1P5-201ENST00000604810 406 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AC015982.1-201ENST00000608113 465 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 AC116667.2-201ENST00000641075 823 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 NEPNP-201ENST00000404786 1371 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 RARSP1-201ENST00000542842 1418 ntBASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
NEDD1Q8NHV4 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 ANKRD26P2-201ENST00000445530 1710 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 CCAT2-201ENST00000630920 1752 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 AC016251.2-201ENST00000623393 3089 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 AC007406.5-201ENST00000570140 3170 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 RNU6-845P-201ENST00000362578 103 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 SNORD8-201ENST00000363915 110 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 AC093719.1-202ENST00000392735 373 ntBASIC7.15□□□□□ -1.26
NEDD1Q8NHV4 RPL35AP3-201ENST00000414680 288 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms