Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATG4DQ86TL0 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 SMG1P5-202ENST00000529428 4219 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 SMG1P2-201ENST00000566127 4221 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC011369.2-201ENST00000624423 1567 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 OR5P1P-201ENST00000299512 925 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 RNU5D-1-201ENST00000363299 116 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 SNORD35A-201ENST00000363389 86 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 Y_RNA.146-201ENST00000363549 102 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 RNA5SP115-201ENST00000411160 107 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 RPS7P15-201ENST00000415804 584 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC073136.2-201ENST00000417282 849 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 MRPS21P5-201ENST00000417885 231 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 CYP4F30P-202ENST00000420048 405 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 GAPDHP19-201ENST00000431768 1005 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 COX6CP18-201ENST00000448769 222 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC006480.1-201ENST00000449887 378 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC130509.1-201ENST00000464158 433 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC096741.1-201ENST00000472250 846 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 RN7SL165P-201ENST00000477476 291 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 GAPDHP39-201ENST00000481866 979 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 RPL17P2-201ENST00000491913 451 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC018645.1-201ENST00000505003 109 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 SNX5P1-201ENST00000505757 1041 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 BTF3P13-201ENST00000513224 490 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC093816.1-201ENST00000515076 913 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 COX6B1P4-201ENST00000519826 484 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AP003122.4-201ENST00000530980 758 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 GTF2IP8-201ENST00000560687 584 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 MIR5697-201ENST00000578045 78 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 H3F3BP2-201ENST00000583907 357 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AL512605.2-201ENST00000592972 256 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AL133215.3-201ENST00000609801 448 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC108479.2-201ENST00000617314 601 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 RMST_7.1-201ENST00000621935 268 ntBASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4DQ86TL0 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC091046.3-201ENST00000631455 1574 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC006511.3-201ENST00000624929 1783 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC022507.1-201ENST00000548349 1505 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 SNORD16-201ENST00000362803 99 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms