Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RBPJP7-201ENST00000442803 1447 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 RBPJP5-201ENST00000449433 1447 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 OR9K1P-201ENST00000326513 941 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 RN7SKP6-201ENST00000364795 319 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC127391.1-201ENST00000411737 98 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 RPL18AP14-201ENST00000417685 526 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC114482.1-201ENST00000418010 247 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 ATP5JP1-201ENST00000431631 322 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC013403.1-201ENST00000436954 263 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 CACYBPP1-201ENST00000438592 684 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC011742.2-201ENST00000443818 352 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 OR13K1P-201ENST00000444577 975 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 RPL7P59-201ENST00000447700 943 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 MTCO1P27-201ENST00000448269 226 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 RPL7AP71-201ENST00000451120 739 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 RN7SL390P-201ENST00000470634 284 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 TRBV8-2-201ENST00000475637 270 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AL135752.1-201ENST00000479477 471 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC068522.1-201ENST00000482895 345 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 RNU6-559P-201ENST00000516151 98 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 RNU6-150P-201ENST00000516237 95 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 RNA5SP278-201ENST00000517055 102 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC138832.1-201ENST00000522871 556 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 DPPA3P2-201ENST00000553589 478 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 FXNP1-201ENST00000555153 337 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 HMGN1P26-201ENST00000558737 303 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC079075.1-201ENST00000559543 878 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 CTSLP2-201ENST00000580501 394 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 NUTF2P8-201ENST00000604593 363 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC006924.1-201ENST00000610750 559 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AL133173.2-201ENST00000614270 90 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC099654.6-201ENST00000636487 512 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 NBPF8-201ENST00000583271 5330 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 CASC19-260ENST00000641828 2001 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
LYSMD3Q7Z3D4 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 NACAP2-201ENST00000318548 624 ntBASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 RPL7P26-201ENST00000333817 754 ntBASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 PPIAP26-201ENST00000377951 522 ntBASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 RNU6-769P-201ENST00000384407 104 ntBASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 RNU6-1297P-201ENST00000384415 104 ntBASIC6.86□□□□□ -1.31
LYSMD3Q7Z3D4 RNU6-456P-201ENST00000384493 107 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms