Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 RNU4-39P-201ENST00000362455 127 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 RNU6-1320P-201ENST00000390838 107 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 RNU6-1269P-201ENST00000391139 107 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 AL592291.1-201ENST00000403830 352 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 RPL21P108-201ENST00000413857 481 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 EIF4EP1-201ENST00000422311 642 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 RPL7AP25-201ENST00000423357 805 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 RPL12P28-201ENST00000430852 489 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 RPL23AP93-201ENST00000440847 484 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 AL121877.1-201ENST00000453704 622 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 RNU6-599P-201ENST00000459383 107 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 RNU6-1193P-201ENST00000459461 107 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 AC013356.1-201ENST00000489027 564 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 CEACAMP10-202ENST00000495431 496 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CTR9Q6PD62 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 PPM1AP1-201ENST00000502740 1135 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 AC025674.1-201ENST00000507074 324 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 AC034205.1-201ENST00000520621 638 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 PDCD5P1-201ENST00000543528 309 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 AC015912.2-201ENST00000571053 181 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 AL023583.1-201ENST00000607518 1143 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 AC239803.2-201ENST00000610161 430 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 RNU6-368P-201ENST00000620928 107 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 RNU6-538P-201ENST00000622329 107 ntBASIC5.44□□□□□ -1.54
CTR9Q6PD62 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTR9Q6PD62 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTR9Q6PD62 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTR9Q6PD62 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.44□□□□□ -1.54
CTR9Q6PD62 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
CTR9Q6PD62 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.43□□□□□ -1.54
CTR9Q6PD62 AC092435.4-201ENST00000623012 4159 ntBASIC5.43□□□□□ -1.54
CTR9Q6PD62 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTR9Q6PD62 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.43□□□□□ -1.54
CTR9Q6PD62 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CTR9Q6PD62 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CTR9Q6PD62 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.43□□□□□ -1.54
CTR9Q6PD62 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
CTR9Q6PD62 RNA5SP447-201ENST00000363749 119 ntBASIC5.43□□□□□ -1.54
CTR9Q6PD62 AC019155.1-201ENST00000382242 574 ntBASIC5.43□□□□□ -1.54
CTR9Q6PD62 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.43□□□□□ -1.54
CTR9Q6PD62 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.43□□□□□ -1.54
CTR9Q6PD62 AP001324.1-201ENST00000428553 399 ntBASIC5.43□□□□□ -1.54
CTR9Q6PD62 Z85994.2-201ENST00000434327 452 ntBASIC5.43□□□□□ -1.54
CTR9Q6PD62 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.43□□□□□ -1.54
CTR9Q6PD62 AL935212.3-201ENST00000450729 284 ntBASIC5.43□□□□□ -1.54
CTR9Q6PD62 AC005008.1-201ENST00000456151 612 ntBASIC5.43□□□□□ -1.54
CTR9Q6PD62 MTND2P28-201ENST00000457540 1044 ntBASIC5.43□□□□□ -1.54
CTR9Q6PD62 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.43□□□□□ -1.54
CTR9Q6PD62 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.43□□□□□ -1.54
CTR9Q6PD62 UBA52P3-201ENST00000491303 382 ntBASIC5.43□□□□□ -1.54
CTR9Q6PD62 AP000827.1-201ENST00000527814 258 ntBASIC5.43□□□□□ -1.54
CTR9Q6PD62 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.43□□□□□ -1.54
CTR9Q6PD62 AL049874.4-201ENST00000557593 255 ntBASIC5.43□□□□□ -1.54
CTR9Q6PD62 AC130352.1-201ENST00000602979 661 ntBASIC5.43□□□□□ -1.54
CTR9Q6PD62 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.43□□□□□ -1.54
CTR9Q6PD62 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
CTR9Q6PD62 AC108751.5-201ENST00000492880 1336 ntBASIC5.43□□□□□ -1.54
CTR9Q6PD62 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CTR9Q6PD62 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CTR9Q6PD62 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.43□□□□□ -1.54
CTR9Q6PD62 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CTR9Q6PD62 AL133243.3-201ENST00000617415 3004 ntBASIC5.42□□□□□ -1.54
CTR9Q6PD62 AL133268.1-201ENST00000405676 1401 ntBASIC5.42□□□□□ -1.54
CTR9Q6PD62 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.42□□□□□ -1.54
CTR9Q6PD62 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTR9Q6PD62 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.42□□□□□ -1.54
CTR9Q6PD62 RNU1-83P-201ENST00000363426 164 ntBASIC5.42□□□□□ -1.54
CTR9Q6PD62 MIR708-201ENST00000390708 88 ntBASIC5.42□□□□□ -1.54
CTR9Q6PD62 RPL23AP59-201ENST00000399415 461 ntBASIC5.42□□□□□ -1.54
CTR9Q6PD62 RPL18P10-201ENST00000425606 538 ntBASIC5.42□□□□□ -1.54
CTR9Q6PD62 IPMKP1-201ENST00000425988 855 ntBASIC5.42□□□□□ -1.54
CTR9Q6PD62 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.42□□□□□ -1.54
CTR9Q6PD62 RPS26P4-201ENST00000431743 355 ntBASIC5.42□□□□□ -1.54
CTR9Q6PD62 FTH1P16-201ENST00000435241 552 ntBASIC5.42□□□□□ -1.54
CTR9Q6PD62 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.42□□□□□ -1.54
CTR9Q6PD62 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.42□□□□□ -1.54
CTR9Q6PD62 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CTR9Q6PD62 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.42□□□□□ -1.54
CTR9Q6PD62 OR8G5-201ENST00000524943 1041 ntBASIC5.42□□□□□ -1.54
CTR9Q6PD62 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms