Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.36□□□□□ -1.87
CCL20P78556 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCL20P78556 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCL20P78556 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCL20P78556 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CCL20P78556 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.35□□□□□ -1.87
CCL20P78556 AP000756.2-201ENST00000624168 2567 ntBASIC3.35□□□□□ -1.87
CCL20P78556 MAPK10-373ENST00000641983 6772 ntBASIC3.35□□□□□ -1.87
CCL20P78556 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC3.35□□□□□ -1.87
CCL20P78556 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCL20P78556 TMSB4XP4-201ENST00000323496 618 ntBASIC3.35□□□□□ -1.87
CCL20P78556 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.35□□□□□ -1.87
CCL20P78556 SMC4P1-201ENST00000414479 527 ntBASIC3.35□□□□□ -1.87
CCL20P78556 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCL20P78556 CHEK2P3-201ENST00000416118 248 ntBASIC3.35□□□□□ -1.87
CCL20P78556 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCL20P78556 IPMKP1-201ENST00000425988 855 ntBASIC3.35□□□□□ -1.87
CCL20P78556 AL158073.1-201ENST00000426848 1104 ntBASIC3.35□□□□□ -1.87
CCL20P78556 AC087650.1-201ENST00000431445 468 ntBASIC3.35□□□□□ -1.87
CCL20P78556 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCL20P78556 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCL20P78556 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.35□□□□□ -1.87
CCL20P78556 MYO5BP2-201ENST00000449815 1277 ntBASIC3.35□□□□□ -1.87
CCL20P78556 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.35□□□□□ -1.87
CCL20P78556 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.35□□□□□ -1.87
CCL20P78556 RPL35AP15-201ENST00000468042 339 ntBASIC3.35□□□□□ -1.87
CCL20P78556 AC094085.1-201ENST00000468914 584 ntBASIC3.35□□□□□ -1.87
CCL20P78556 STRADBP1-201ENST00000478954 1281 ntBASIC3.35□□□□□ -1.87
CCL20P78556 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC3.35□□□□□ -1.87
CCL20P78556 GAPDHP56-201ENST00000506031 988 ntBASIC3.35□□□□□ -1.87
CCL20P78556 ATP1B1P1-201ENST00000509767 915 ntBASIC3.35□□□□□ -1.87
CCL20P78556 RNU2-30P-201ENST00000516209 141 ntBASIC3.35□□□□□ -1.87
CCL20P78556 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.35□□□□□ -1.87
CCL20P78556 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.35□□□□□ -1.87
CCL20P78556 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.35□□□□□ -1.87
CCL20P78556 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.35□□□□□ -1.87
CCL20P78556 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.35□□□□□ -1.87
CCL20P78556 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCL20P78556 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.35□□□□□ -1.87
CCL20P78556 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.35□□□□□ -1.87
CCL20P78556 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.35□□□□□ -1.87
CCL20P78556 AC073091.2-201ENST00000603205 907 ntBASIC3.35□□□□□ -1.87
CCL20P78556 AP003392.5-201ENST00000607857 415 ntBASIC3.35□□□□□ -1.87
CCL20P78556 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.35□□□□□ -1.87
CCL20P78556 MIR7702-201ENST00000621931 59 ntBASIC3.35□□□□□ -1.87
CCL20P78556 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
CCL20P78556 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCL20P78556 BX005019.1-201ENST00000561881 1810 ntBASIC3.35□□□□□ -1.87
CCL20P78556 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.35□□□□□ -1.87
CCL20P78556 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
CCL20P78556 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCL20P78556 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
CCL20P78556 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCL20P78556 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
CCL20P78556 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCL20P78556 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCL20P78556 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.34□□□□□ -1.87
CCL20P78556 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
CCL20P78556 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCL20P78556 AC097374.1-203ENST00000400783 485 ntBASIC3.34□□□□□ -1.87
CCL20P78556 OR1F12-201ENST00000402365 945 ntBASIC3.34□□□□□ -1.87
CCL20P78556 AL138878.1-201ENST00000405131 347 ntBASIC3.34□□□□□ -1.87
CCL20P78556 ZSCAN12P1-201ENST00000406489 419 ntBASIC3.34□□□□□ -1.87
CCL20P78556 Z98941.1-201ENST00000407764 100 ntBASIC3.34□□□□□ -1.87
CCL20P78556 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.34□□□□□ -1.87
CCL20P78556 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.34□□□□□ -1.87
CCL20P78556 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.34□□□□□ -1.87
CCL20P78556 AP001324.1-201ENST00000428553 399 ntBASIC3.34□□□□□ -1.87
CCL20P78556 RPL12P46-201ENST00000436610 195 ntBASIC3.34□□□□□ -1.87
CCL20P78556 AC112498.1-201ENST00000444401 332 ntBASIC3.34□□□□□ -1.87
CCL20P78556 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.34□□□□□ -1.87
CCL20P78556 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.34□□□□□ -1.87
CCL20P78556 CLIC4P1-201ENST00000453177 535 ntBASIC3.34□□□□□ -1.87
CCL20P78556 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.34□□□□□ -1.87
CCL20P78556 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCL20P78556 BX284632.1-201ENST00000478218 541 ntBASIC3.34□□□□□ -1.87
CCL20P78556 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.34□□□□□ -1.87
CCL20P78556 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.34□□□□□ -1.87
CCL20P78556 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.34□□□□□ -1.87
CCL20P78556 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.34□□□□□ -1.87
CCL20P78556 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.34□□□□□ -1.87
CCL20P78556 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.34□□□□□ -1.87
CCL20P78556 AC018552.3-201ENST00000567416 561 ntBASIC3.34□□□□□ -1.87
CCL20P78556 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.34□□□□□ -1.87
CCL20P78556 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC3.34□□□□□ -1.87
CCL20P78556 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC3.34□□□□□ -1.87
CCL20P78556 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.34□□□□□ -1.87
CCL20P78556 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.34□□□□□ -1.87
CCL20P78556 AC079395.2-201ENST00000610982 737 ntBASIC3.34□□□□□ -1.87
CCL20P78556 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.34□□□□□ -1.87
CCL20P78556 MIR6071-201ENST00000616741 78 ntBASIC3.34□□□□□ -1.87
CCL20P78556 AL773545.4-201ENST00000637262 310 ntBASIC3.34□□□□□ -1.87
CCL20P78556 AL513478.4-201ENST00000641636 310 ntBASIC3.34□□□□□ -1.87
CCL20P78556 LINC01808-202ENST00000641680 1116 ntBASIC3.34□□□□□ -1.87
CCL20P78556 NCAPGP1-201ENST00000505112 1814 ntBASIC3.34□□□□□ -1.87
CCL20P78556 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCL20P78556 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCL20P78556 AC074029.4-201ENST00000624796 1859 ntBASIC3.34□□□□□ -1.87
CCL20P78556 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCL20P78556 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms