Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL354950.1-201ENST00000614150 568 ntBASIC5.19□□□□□ -1.58
CCNA1P78396 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCNA1P78396 THAP12P5-201ENST00000405864 2275 ntBASIC5.19□□□□□ -1.58
CCNA1P78396 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.19□□□□□ -1.58
CCNA1P78396 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCNA1P78396 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCNA1P78396 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCNA1P78396 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCNA1P78396 AC093535.2-201ENST00000624769 2326 ntBASIC5.19□□□□□ -1.58
CCNA1P78396 PCAT14-202ENST00000627127 3935 ntBASIC5.19□□□□□ -1.58
CCNA1P78396 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CCNA1P78396 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.18□□□□□ -1.58
CCNA1P78396 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNA1P78396 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCNA1P78396 AL359922.3-201ENST00000624779 1670 ntBASIC5.18□□□□□ -1.58
CCNA1P78396 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.18□□□□□ -1.58
CCNA1P78396 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CCNA1P78396 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNA1P78396 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCNA1P78396 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCNA1P78396 RNU1-85P-201ENST00000364127 164 ntBASIC5.18□□□□□ -1.58
CCNA1P78396 RNU4-7P-201ENST00000364758 141 ntBASIC5.18□□□□□ -1.58
CCNA1P78396 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNA1P78396 SNORA48.7-201ENST00000391302 135 ntBASIC5.18□□□□□ -1.58
CCNA1P78396 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.18□□□□□ -1.58
CCNA1P78396 AL445189.1-201ENST00000405722 338 ntBASIC5.18□□□□□ -1.58
CCNA1P78396 SETP15-201ENST00000412724 337 ntBASIC5.18□□□□□ -1.58
CCNA1P78396 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.18□□□□□ -1.58
CCNA1P78396 AL590609.2-201ENST00000421430 368 ntBASIC5.18□□□□□ -1.58
CCNA1P78396 AC243772.1-201ENST00000451620 410 ntBASIC5.18□□□□□ -1.58
CCNA1P78396 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCNA1P78396 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.18□□□□□ -1.58
CCNA1P78396 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCNA1P78396 AC087477.6-201ENST00000559595 843 ntBASIC5.18□□□□□ -1.58
CCNA1P78396 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.18□□□□□ -1.58
CCNA1P78396 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.18□□□□□ -1.58
CCNA1P78396 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.18□□□□□ -1.58
CCNA1P78396 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.18□□□□□ -1.58
CCNA1P78396 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.18□□□□□ -1.58
CCNA1P78396 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNA1P78396 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.18□□□□□ -1.58
CCNA1P78396 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCNA1P78396 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNA1P78396 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.18□□□□□ -1.58
CCNA1P78396 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CCNA1P78396 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.17□□□□□ -1.58
CCNA1P78396 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCNA1P78396 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCNA1P78396 EIF2AP4-201ENST00000424793 1781 ntBASIC5.17□□□□□ -1.58
CCNA1P78396 VN2R3P-201ENST00000422626 1412 ntBASIC5.17□□□□□ -1.58
CCNA1P78396 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.17□□□□□ -1.58
CCNA1P78396 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCNA1P78396 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCNA1P78396 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.17□□□□□ -1.58
CCNA1P78396 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CCNA1P78396 SNORA37-201ENST00000384504 129 ntBASIC5.17□□□□□ -1.58
CCNA1P78396 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.17□□□□□ -1.58
CCNA1P78396 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.17□□□□□ -1.58
CCNA1P78396 AC104333.2-201ENST00000422630 192 ntBASIC5.17□□□□□ -1.58
CCNA1P78396 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCNA1P78396 TMX2P1-201ENST00000436507 708 ntBASIC5.17□□□□□ -1.58
CCNA1P78396 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.17□□□□□ -1.58
CCNA1P78396 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.17□□□□□ -1.58
CCNA1P78396 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.17□□□□□ -1.58
CCNA1P78396 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.17□□□□□ -1.58
CCNA1P78396 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCNA1P78396 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.17□□□□□ -1.58
CCNA1P78396 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.17□□□□□ -1.58
CCNA1P78396 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.17□□□□□ -1.58
CCNA1P78396 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.17□□□□□ -1.58
CCNA1P78396 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCNA1P78396 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.17□□□□□ -1.58
CCNA1P78396 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCNA1P78396 OR8X1P-201ENST00000534542 869 ntBASIC5.17□□□□□ -1.58
CCNA1P78396 AC106785.1-201ENST00000565935 262 ntBASIC5.17□□□□□ -1.58
CCNA1P78396 CYCSP40-201ENST00000575927 294 ntBASIC5.17□□□□□ -1.58
CCNA1P78396 RN7SL176P-201ENST00000580352 264 ntBASIC5.17□□□□□ -1.58
CCNA1P78396 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.17□□□□□ -1.58
CCNA1P78396 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.17□□□□□ -1.58
CCNA1P78396 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.17□□□□□ -1.58
CCNA1P78396 AL161637.1-201ENST00000622380 412 ntBASIC5.17□□□□□ -1.58
CCNA1P78396 MIR492-201ENST00000638676 116 ntBASIC5.17□□□□□ -1.58
CCNA1P78396 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.17□□□□□ -1.58
CCNA1P78396 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCNA1P78396 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.17□□□□□ -1.58
CCNA1P78396 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCNA1P78396 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCNA1P78396 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCNA1P78396 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCNA1P78396 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCNA1P78396 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
CCNA1P78396 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCNA1P78396 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.16□□□□□ -1.58
CCNA1P78396 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCNA1P78396 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCNA1P78396 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCNA1P78396 MIR383-201ENST00000362257 73 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCNA1P78396 AL035696.2-201ENST00000407941 709 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms