Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC003973.3-201ENST00000624863 2822 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.59□□□□□ -1.67
SEC61A1P61619 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.59□□□□□ -1.67
SEC61A1P61619 AC073869.8-201ENST00000641806 335 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SEC61A1P61619 AC126323.6-202ENST00000568092 3511 ntBASIC4.59□□□□□ -1.68
SEC61A1P61619 AP005432.1-201ENST00000580891 3485 ntBASIC4.59□□□□□ -1.68
SEC61A1P61619 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
SEC61A1P61619 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A1P61619 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A1P61619 AC107021.2-201ENST00000567714 2095 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.58□□□□□ -1.68
SEC61A1P61619 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A1P61619 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A1P61619 AL353796.1-201ENST00000561542 3241 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A1P61619 ZNF849P-201ENST00000594711 1566 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.58□□□□□ -1.68
SEC61A1P61619 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SEC61A1P61619 VN2R3P-201ENST00000422626 1412 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SEC61A1P61619 MTND4P10-201ENST00000446199 1363 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AC017007.4-201ENST00000503353 1352 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 SMG1P7-201ENST00000565246 2704 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.58□□□□□ -1.68
SEC61A1P61619 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A1P61619 OR5H2-201ENST00000355273 945 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SEC61A1P61619 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A1P61619 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A1P61619 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.58□□□□□ -1.68
SEC61A1P61619 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A1P61619 RNU6-224P-201ENST00000384055 107 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AC119751.3-201ENST00000399720 670 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 RPS27AP11-201ENST00000402798 447 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A1P61619 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.58□□□□□ -1.68
SEC61A1P61619 BTF3P8-201ENST00000414577 526 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AC016907.1-201ENST00000419483 435 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AL513175.2-201ENST00000422071 443 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.58□□□□□ -1.68
SEC61A1P61619 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.58□□□□□ -1.68
SEC61A1P61619 FO393419.3-201ENST00000428741 282 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 PTENP1-201ENST00000447117 1215 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AL589880.1-201ENST00000448271 287 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A1P61619 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.58□□□□□ -1.68
SEC61A1P61619 AC021205.1-201ENST00000468797 348 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 PRDX3P4-201ENST00000470828 747 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 COPS8P2-201ENST00000473228 627 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AC011037.1-201ENST00000483964 558 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 NIFKP7-201ENST00000503365 834 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A1P61619 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.58□□□□□ -1.68
SEC61A1P61619 HMGB3P16-201ENST00000508037 287 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AC118282.2-201ENST00000508739 374 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AC108120.2-201ENST00000512973 294 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A1P61619 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A1P61619 AC022360.1-201ENST00000521058 340 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AC104417.1-201ENST00000523974 751 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.58□□□□□ -1.68
SEC61A1P61619 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SEC61A1P61619 AC125612.1-201ENST00000547580 377 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A1P61619 AL049870.4-201ENST00000555741 486 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AGGF1P6-201ENST00000569213 976 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A1P61619 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.58□□□□□ -1.68
SEC61A1P61619 AC007448.1-201ENST00000582714 234 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AC091057.2-201ENST00000602594 792 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A1P61619 AC069304.3-201ENST00000603938 1084 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 AL049844.2-201ENST00000604280 628 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 SUMO2P15-201ENST00000604285 278 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.58□□□□□ -1.68
SEC61A1P61619 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.58□□□□□ -1.68
SEC61A1P61619 AC119674.1-212ENST00000641155 993 ntBASIC4.58□□□□□ -1.68
SEC61A1P61619 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.58□□□□□ -1.68
SEC61A1P61619 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.58□□□□□ -1.68
SEC61A1P61619 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A1P61619 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A1P61619 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.58□□□□□ -1.68
SEC61A1P61619 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SEC61A1P61619 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SEC61A1P61619 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SEC61A1P61619 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
SEC61A1P61619 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.57□□□□□ -1.68
SEC61A1P61619 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
SEC61A1P61619 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SEC61A1P61619 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SEC61A1P61619 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SEC61A1P61619 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SEC61A1P61619 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SEC61A1P61619 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.57□□□□□ -1.68
SEC61A1P61619 RNU6-1214P-201ENST00000363650 109 ntBASIC4.57□□□□□ -1.68
SEC61A1P61619 RNA5SP335-201ENST00000363817 110 ntBASIC4.57□□□□□ -1.68
SEC61A1P61619 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SEC61A1P61619 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms